RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 VSTM2LQ96N03 204 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF582Q96NG8 517 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ST6GALNAC5Q9BVH7 336 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 SSBP3Q9BWW4 388 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 WDR12Q9GZL7 423 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 WNT10AQ9GZT5 417 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 EGLN3Q9H6Z9 239 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 IL20Q9NYY1 176 aa6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 DIMT1Q9UNQ2 313 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 EXOSC1Q9Y3B2 195 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-206ENST00000489414 ARPC4-TTLL3A0A0A6YYG9 625 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 LOC100506127A0A0U1RQW1 187 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 MEGF11A6BM72 1044 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 RIIAD1A6NNX1 92 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 GTPBP1O00178 669 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 EFNA2O43921 213 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 PRKYO43930 277 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 IFNGP01579 166 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 CT45A8P0DMV1 189 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 CT45A9P0DMV2 189 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 PRG2P13727 222 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 FSTP19883 344 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 NOS3P29474 1203 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 GRK5P34947 590 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 RGS6P49758 472 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ERVFRD-1P60508 538 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 VBP1P61758 197 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 LSM3P62310 102 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 PRKCDQ05655 676 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 SLC3A1Q07837 685 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF846Q147U1 533 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 SPCS2Q15005 226 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 SPHARQ15513 63 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 MAPK14Q16539 360 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF829Q3KNS6 432 aaPredicted RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ALKBH6Q3KRA9 238 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 CT45A2Q5DJT8 189 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ALG10BQ5I7T1 473 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 CLEC12AQ5QGZ9 265 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 LGALS9CQ6DKI2 356 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ABLIM2Q6H8Q1 611 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF774Q6NX45 483 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ULK3Q6PHR2 472 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ETV3LQ6ZN32 361 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 TMPRSS11FQ6ZWK6 438 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 MARCH3Q86UD3 253 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 CADM2Q8N3J6 435 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 TMCO5AQ8N6Q1 288 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 LSMEM1Q8N8F7 131 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 PROKR2Q8NFJ6 384 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 CNOT9Q92600 299 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 BPIFA2Q96DR5 249 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 LGALS12Q96DT0 336 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 RNFT2Q96EX2 444 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ELMOD3Q96FG2 381 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 MGLLQ99685 303 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 PCGF1Q9BSM1 259 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 DCSTAMPQ9H295 470 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 FN3KQ9H479 309 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 SAP30LQ9HAJ7 183 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 MOV10Q9HCE1 1003 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 HINT3Q9NQE9 182 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 UBQLN4Q9NRR5 601 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF256Q9Y2P7 627 aaPredicted RBP6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 NPTNQ9Y639 398 aa6.07□□□□□ -1.44
EXOSC3-206ENST00000489414 A0A0B4J2E0 115 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 A0A1B0GWA3 101 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 A0A1B0GX12 115 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 AQP7P3A6NL99 342 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 GJE1A6NN92 205 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF716A6NP11 495 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 P2RY10O00398 339 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 KPNA4O00629 521 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SURF4O15260 269 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SHOXO15266 292 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MRPL33O75394 65 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 PTHP01270 115 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SCG5P05408 212 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SBK2P0C263 348 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 TSPAN19P0C672 248 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 PNMTP11086 282 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 UBL4AP11441 157 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MMP9P14780 707 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF3P17036 446 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MAKP20794 623 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 GADD45AP24522 165 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 PSMA1P25786 263 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 CNTFRP26992 372 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 HTR2AP28223 471 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SLC6A6P31641 620 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 S100A5P33763 92 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 GLRXP35754 106 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 CFHR2P36980 270 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 LIPAP38571 399 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SLC9A3P48764 834 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 CCR4P51679 360 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 C17orf67Q0P5P2 114 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MLLT11Q13015 90 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 TMED1Q13445 227 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms