RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CCDC157Q569K6 752 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 SLC25A53Q5H9E4 307 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 THEM4Q5T1C6 240 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 NAXDQ8IW45 347 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 OR2M3Q8NG83 312 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 OR10R2Q8NGX6 335 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 OR6K3Q8NGY3 331 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 OR4K15Q8NH41 348 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 C1orf147Q96MC9 270 aaPredicted RBP11.18□□□□□ -0.62
CLIC4-202ENST00000488683 MYOZ1Q9NP98 299 aaPredicted RBP11.18□□□□□ -0.62
CLIC4-202ENST00000488683 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
CLIC4-202ENST00000488683 PFDN2Q9UHV9 154 aa11.18□□□□□ -0.62
CLIC4-202ENST00000488683 SULT2B1O00204 365 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 PDGFBP01127 241 aaPredicted RBP11.17□□□□□ -0.62
CLIC4-202ENST00000488683 CD8AP01732 235 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 GLI4P10075 376 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SERPINA2P20848 420 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 GABREP78334 506 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 PDZD9Q8IXQ8 264 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 PNLDC1Q8NA58 520 aaKnown RBP11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SPERTQ8NA61 448 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 OR5D14Q8NGL3 314 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 OR5M9Q8NGP3 310 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 OR2AE1Q8NHA4 323 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 DYRK2Q92630 601 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 MRPS24Q96EL2 167 aaKnown RBP11.17□□□□□ -0.62
CLIC4-202ENST00000488683 LYZL4Q96KX0 146 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 DEFB126Q9BYW3 111 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SMOC1Q9H4F8 434 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 PRDM6Q9NQX0 595 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SDHAF3Q9NRP4 125 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 RARRES3Q9UL19 164 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 TMEM14DPA8MWL7 114 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 DISC1C4P0D8 188 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF878C9JN71 531 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 DKK1O94907 266 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 BPNT1O95861 308 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 F12P00748 615 aaPredicted RBP11.17□□□□□ -0.62
CLIC4-202ENST00000488683 IGHG1P01857 330 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 IFNA6P05013 189 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 CCL3P10147 92 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 ZP3P21754 424 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SERPINF1P36955 418 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 GPR85P60893 370 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 DEFA5Q01523 94 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF468Q5VIY5 522 aaPredicted RBP11.17□□□□□ -0.62
CLIC4-202ENST00000488683 RAB12Q6IQ22 244 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 C11orf87Q6NUJ2 197 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SLC25A42Q86VD7 318 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 C20orf196Q8IYI0 205 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 BVESQ8NE79 360 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 OR4K17Q8NGC6 315 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 SLC2A8Q9NY64 477 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 ZNF107Q9UII5 783 aaPredicted RBP11.17□□□□□ -0.62
CLIC4-202ENST00000488683 GPR179Q6PRD1 2367 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 NCKAP5O14513 1909 aa11.17□□□□□ -0.62
CLIC4-202ENST00000488683 IGKV1D-8A0A087WSZ0 117 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 IGLV3-32A0A0A0MS00 114 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 A0A0B4J2A0 478 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 TOX3O15405 576 aaPredicted RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 EFSO43281 561 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 ZFAND5O76080 213 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 PGAM2P15259 253 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 LYG2Q86SG7 212 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 OR5L2Q8NGL0 311 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 PRRT1Q99946 306 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 UQCC2Q9BRT2 126 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 RBM24Q9BX46 236 aaKnown RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 SHPKQ9UHJ6 478 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 FREM1Q5H8C1 2179 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 MSGN1A6NI15 193 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 STMND1H3BQB6 276 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 CDK2AP1O14519 115 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 CDC14BO60729 498 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 HPP00738 406 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 GLRA1P23415 457 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 EPHA8P29322 1005 aaPredicted RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 RPS18P62269 152 aaKnown RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 MEF2DQ14814 521 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 CLVS2Q5SYC1 327 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 CLEC9AQ6UXN8 241 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 EDAQ92838 391 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 SPACA9Q96E40 222 aaPredicted RBP11.16□□□□□ -0.62
CLIC4-202ENST00000488683 MED9Q9NWA0 146 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
CLIC4-202ENST00000488683 A8MXK9 166 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 F5H0A9 414 aaPredicted RBP11.15□□□□□ -0.62
CLIC4-202ENST00000488683 ANGPTL7O43827 346 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 CFIP05156 583 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 MSX1P28360 303 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 CASRP41180 1078 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 STARP49675 285 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 CHAF1BQ13112 559 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 ARFRP1Q13795 201 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 LPAL2Q16609 132 aa11.15□□□□□ -0.62
CLIC4-202ENST00000488683 RAET1LQ5VY80 246 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms