RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 E9PLN8 166 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 STK17BO94768 372 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 MPIG6BO95866 241 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 WDPCPO95876 746 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 CD8AP01732 235 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 CD63P08962 238 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 GSTP1P09211 210 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 ZBTB25P24278 435 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 AANATQ16613 207 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 LYG2Q86SG7 212 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 RTN4RL2Q86UN3 420 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 ARMC10Q8N2F6 343 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 TMEM41AQ96HV5 264 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 SLC39A1Q9NY26 324 aa15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 NOP16Q9Y3C1 178 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-207ENST00000486828 IGKV1-9A0A0C4DH69 117 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 I3L521 148 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 CBR3O75828 277 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 CRYZL1O95825 349 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 IL2RAP01589 272 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 UBBP0CG47 229 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 RAC1P63000 192 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 HIST1H3AP68431 136 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 FAM189A2Q15884 450 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 TRIM61Q5EBN2 209 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 HIST2H3PS2Q5TEC6 136 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 HIST2H3AQ71DI3 136 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 LYZL4Q96KX0 146 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 TMEM59Q9BXS4 323 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 ANAPC10Q9UM13 185 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 C5orf63A6NC05 138 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 SOCS1O15524 211 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 DHHO43323 396 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 HIST1H1DP16402 221 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 SUCLG1P53597 346 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 LPAL2Q16609 132 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 FAHD2BQ6P2I3 314 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 GSG1LQ6UXU4 331 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 BEST3Q8N1M1 668 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 SCARB1Q8WTV0 552 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 INTS12Q96CB8 462 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 RAB3CQ96E17 227 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 FAHD2AQ96GK7 314 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 GPER1Q99527 375 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 PIGQQ9BRB3 760 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 MFFQ9GZY8 342 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 CST11Q9H112 138 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 FOXD3Q9UJU5 478 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 R4GN57 208 aa15.82■□□□□ 0.12
PDLIM7-207ENST00000486828 LOC100509620A0A075B734 347 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 A0A0J9YW62 118 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 A0A0U1RQV5 110 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 IGHEP01854 428 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 IFNA6P05013 189 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 LIPCP11150 499 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 PRF1P14222 555 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 POU3F2P20265 443 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 AGTR1P30556 359 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 CALCRP30988 508 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 FGL1Q08830 312 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 TCF15Q12870 199 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 ECH1Q13011 328 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 PPP1R1AQ13522 171 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 PLAC9Q5JTB6 97 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 LIN54Q6MZP7 749 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 NAA40Q86UY6 237 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 PRSS33Q8NF86 280 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 BANF2Q9H503 90 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 MED12Q93074 2177 aa15.81■□□□□ 0.12
PDLIM7-207ENST00000486828 OR5H15A6NDH6 313 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 GJE1A6NN92 205 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 OR2AT4A6NND4 320 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 MASP2O00187 686 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 TNFSF11O14788 317 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 HLA-GP17693 338 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 THBS4P35443 961 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 GK2Q14410 553 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF468Q5VIY5 522 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 ZIC4Q8N9L1 334 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 OR56B1Q8NGI3 324 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 OR6K3Q8NGY3 331 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 OR4K15Q8NH41 348 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 RBM24Q9BX46 236 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF230Q9UIE0 474 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 V9GYS6 101 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 A0A1W2PP11 408 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 C9orf170A2RU37 121 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 F5H5K5 113 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 CRTAPO75718 401 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 PMP2P02689 132 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 OTX1P32242 354 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 SLC6A9P48067 706 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 TMEM50BP56557 158 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 PNLIPRP3Q17RR3 467 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 TMEM65Q6PI78 240 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 SLC23A3Q6PIS1 610 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 ALKAL2Q6UX46 152 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 LRRC18Q8N456 261 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 PNLDC1Q8NA58 520 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 MITD1Q8WV92 249 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms