RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RGS7BPQ6MZT1 257 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-229ENST00000486665 UNQ6126/PRO20091Q6UXV3 157 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 FBXW12Q6X9E4 464 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 PHC2Q8IXK0 858 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 PLPP7Q8NBV4 271 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 OR51A4Q8NGJ6 313 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 OR13C5Q8NGS8 318 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 UFD1Q92890 307 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 HAVCR1Q96D42 359 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 FAM71F1Q96KD3 344 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-229ENST00000486665 DLL4Q9NR61 685 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 CISD1Q9NZ45 108 aaKnown RBP10.95□□□□□ -0.66
HDAC6-229ENST00000486665 PLEKHA6Q9Y2H5 1048 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 ZNF281Q9Y2X9 895 aa10.95□□□□□ -0.66
HDAC6-229ENST00000486665 SF3B6Q9Y3B4 125 aaKnown RBP10.95□□□□□ -0.66
HDAC6-229ENST00000486665 hCG_38984A0A1B0GV85 526 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 LOC107986453A0A1B0GWG9 222 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 TMEM212A6NML5 194 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 OR4A8P0C604 315 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 UBCP0CG48 685 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 ACHEP22303 614 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 CCL1P22362 96 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 TUBG1P23258 451 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 ACKR3P25106 362 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 GSK3AP49840 483 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 RPS25P62851 125 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 GPR50Q13585 617 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 ADIPOQQ15848 244 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 MBNL2Q5VZF2 373 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 Q6ZSR3 168 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 PGAP1Q75T13 922 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 MRPL21Q7Z2W9 205 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 COMMD2Q86X83 199 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 C1orf174Q8IYL3 243 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 OR14K1Q8NGZ2 314 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 SYNPRQ8TBG9 265 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 SYT3Q9BQG1 590 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 MRPL37Q9BZE1 423 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 RGCCQ9H4X1 137 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 ZNF442Q9H7R0 627 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 VCX3AQ9NNX9 186 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 TUBG2Q9NRH3 451 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 MYEF2Q9P2K5 600 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 DUSP13Q9UII6 198 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 CMAHPQ9Y471 501 aa10.94□□□□□ -0.66
HDAC6-229ENST00000486665 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 HEATR1Q9H583 2144 aaKnown RBP10.94□□□□□ -0.66
HDAC6-229ENST00000486665 A0A1B0GVI7 797 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 A6NIN4 97 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 CD300LBA8K4G0 201 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 SYT7O43581 403 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 LILRA1O75019 489 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 GOSR1O95249 250 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 RAC2P15153 192 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 GCH1P30793 250 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 TGFBR2P37173 567 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 RPS23P62266 143 aaKnown RBP10.93□□□□□ -0.66
HDAC6-229ENST00000486665 INSL4Q14641 139 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 MST1LQ2TV78 715 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 DOK3Q7L591 496 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 TMEM203Q969S6 136 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 MRPL24Q96A35 216 aaKnown RBP10.93□□□□□ -0.66
HDAC6-229ENST00000486665 YIPF6Q96EC8 236 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 DHRS9Q9BPW9 319 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 TMED9Q9BVK6 235 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 COMMD4Q9H0A8 199 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 CLEC4MQ9H2X3 399 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-229ENST00000486665 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 PURGQ9UJV8 347 aaKnown RBP10.93□□□□□ -0.66
HDAC6-229ENST00000486665 HHLA2Q9UM44 414 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 V9GYS6 101 aa10.93□□□□□ -0.66
HDAC6-229ENST00000486665 TRBV5-5A0A0J9YX44 114 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 GGT3PA6NGU5 568 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 H3BSA7 217 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 CCRL2O00421 344 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 HS3ST1O14792 307 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 IGHV3-13P01766 116 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 CD53P19397 219 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 KITLGP21583 273 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 CFL1P23528 166 aaKnown RBP10.92□□□□□ -0.66
HDAC6-229ENST00000486665 APOBEC3AP31941 199 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-229ENST00000486665 SERPINF1P36955 418 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 SOX2P48431 317 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 OR8B8Q15620 311 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 YIF1BQ5BJH7 314 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 UNQ9370/PRO34162Q6UXP9 181 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 TMEM91Q6ZNR0 172 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 OR5AS1Q8N127 324 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 OR56B2PQ8NGI1 322 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 OR13F1Q8NGS4 319 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 GPR148Q8TDV2 347 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 GTF3AQ92664 365 aaKnown RBP10.92□□□□□ -0.66
HDAC6-229ENST00000486665 NINJ1Q92982 152 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 FGGYQ96C11 551 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 PPP1R3EQ9H7J1 279 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 TAAR3PQ9P1P4 343 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 ZNF391Q9UJN7 358 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
HDAC6-229ENST00000486665 IGLV3-9A0A075B6K5 115 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms