RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GATAD2BQ8WXI9 593 aa9.49□□□□□ -0.89
SCFD1-206ENST00000484733 PCGF1Q9BSM1 259 aa9.49□□□□□ -0.89
SCFD1-206ENST00000484733 BEX1Q9HBH7 125 aa9.49□□□□□ -0.89
SCFD1-206ENST00000484733 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 TIPRLO75663 272 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 GYPAP02724 150 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 GRPP07492 148 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 MUC1P15941 1255 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-206ENST00000484733 CFL1P23528 166 aaKnown RBP9.48□□□□□ -0.89
SCFD1-206ENST00000484733 FAM3AP98173 230 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 HOXA4Q00056 320 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-206ENST00000484733 SNCBQ16143 134 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 METTL11BQ5VVY1 283 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 LCN8Q6JVE9 175 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 FAM90A1Q86YD7 464 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 RNF133Q8WVZ7 376 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 SGK3Q96BR1 496 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 SMURF1Q9HCE7 757 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 CMC2Q9NRP2 79 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 DHRS12A0PJE2 317 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 DVL1O14640 695 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 FCN3O75636 299 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 CRYBA1P05813 215 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 SFTPBP07988 381 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 CX3CR1P49238 355 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 RUSC1-AS1Q66K80 236 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 OR2T5Q6IEZ7 315 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 CYP2R1Q6VVX0 501 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 BTN2A1Q7KYR7 527 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 SHFQ7M4L6 423 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 SLC16A9Q7RTY1 509 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 LDLRAD3Q86YD5 345 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 OR2T29Q8NH02 315 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 TBC1D15Q8TC07 691 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 TLNRD1Q9H1K6 362 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 C1RLQ9NZP8 487 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 KPTNQ9Y664 436 aa9.48□□□□□ -0.89
SCFD1-206ENST00000484733 hCG_38984A0A1B0GV85 526 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 A6NLC8 198 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 GPR37O15354 613 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 KCNAB3O43448 404 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 SLC2A1P11166 492 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 NAA10P41227 235 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 RAG2P55895 527 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 MXRA7P84157 204 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 EIF2B1Q14232 305 aaKnown RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 OLFML2AQ68BL7 652 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 FIP1L1Q6UN15 594 aaKnown RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 DPY19L4Q7Z388 723 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 CSNK2A3Q8NEV1 391 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 OR1M1Q8NGA1 313 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 OR52H1Q8NGJ2 320 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 OR8S1Q8NH09 359 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 SSMEM1Q8WWF3 244 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 REEP6Q96HR9 211 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 RGCCQ9H4X1 137 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 CNTD2Q9H8S5 307 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 REEP1Q9H902 201 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 ABCB9Q9NP78 766 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 ACOXLQ9NUZ1 547 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 ARMC1Q9NVT9 282 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 VNN3Q9NY84 501 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 RIIAD1A6NNX1 92 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 TBX1O43435 398 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 KNG1P01042 644 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 GYPBP06028 91 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 CLUP10909 449 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 ZNF3P17036 446 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 TIGD6Q17RP2 521 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 KLHL12Q53G59 568 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 ATPAF1Q5TC12 328 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 WDR86Q86TI4 376 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 GALNT4Q8N4A0 578 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 OR10Z1Q8NGY1 313 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 WFDC12Q8WWY7 111 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 INTS14Q96SY0 518 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 ABHD6Q9BV23 337 aa9.47□□□□□ -0.89
SCFD1-206ENST00000484733 RPUSD1Q9UJJ7 312 aaKnown RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 SAMHD1Q9Y3Z3 626 aaKnown RBP9.47□□□□□ -0.89
SCFD1-206ENST00000484733 hCG_1807616A0A1W2PRN6 198 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 CLPSL1A2RUU4 121 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 ARRDC5A6NEK1 342 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 GLCEO94923 617 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 ANXA2P07355 339 aaKnown RBP9.46□□□□□ -0.9
SCFD1-206ENST00000484733 OMGP23515 440 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 HSD11B1P28845 292 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 GSTT1P30711 240 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 OPRL1P41146 370 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 GSK3AP49840 483 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 TRIM25Q14258 630 aaKnown RBP9.46□□□□□ -0.9
SCFD1-206ENST00000484733 MICBQ29980 383 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 FAM98BQ52LJ0 330 aaKnown RBP9.46□□□□□ -0.9
SCFD1-206ENST00000484733 METAP1DQ6UB28 335 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms