RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 DEFA1P59665 94 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 DEFA3P59666 94 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 SORDQ00796 357 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 MALLQ13021 153 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 TMEM108Q6UXF1 575 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 RFPL4BQ6ZWI9 263 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 DOK3Q7L591 496 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 CADM3Q8N126 398 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 OR5L1Q8NGL2 311 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 MCFD2Q8NI22 146 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 NOX4Q9NPH5 578 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-205ENST00000482968 PTTG3PQ9NZH4 202 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 PMF1-BGLAPU3KQ54 211 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 SPTBN1Q01082 2364 aaKnown RBP12.97□□□□□ -0.33
PHGDH-205ENST00000482968 PTTG1O95997 202 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 RAD52P43351 418 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 GK2Q14410 553 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-205ENST00000482968 HLXQ14774 488 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-205ENST00000482968 SPATA46Q5T0L3 261 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 USP43Q70EL4 1123 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 KBTBD8Q8NFY9 601 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 OR1J1Q8NGS3 322 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 FGGYQ96C11 551 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 RADILQ96JH8 1075 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 KCTD7Q96MP8 289 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 DERL3Q96Q80 235 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
PHGDH-205ENST00000482968 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-205ENST00000482968 CADP27708 2225 aa12.96□□□□□ -0.33
PHGDH-205ENST00000482968 DPRXA6NFQ7 191 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 PIN1P1O15428 100 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 MTRF1O75570 445 aaKnown RBP12.96□□□□□ -0.34
PHGDH-205ENST00000482968 UPK1BO75841 260 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 APOA1P02647 267 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 BMP4P12644 408 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 CCL1P22362 96 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 PTAFRP25105 342 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 ERVS71-1P61550 626 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 PPP1CBP62140 327 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 FAM3AP98173 230 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 SPOCK1Q08629 439 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 ZNF404Q494X3 552 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 AKAP14Q86UN6 197 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 PLPP7Q8NBV4 271 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 OR14K1Q8NGZ2 314 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 AKAP1Q92667 903 aaKnown RBP eCLIP12.96□□□□□ -0.34
PHGDH-205ENST00000482968 SLIRPQ9GZT3 109 aaKnown RBP12.96□□□□□ -0.34
PHGDH-205ENST00000482968 RGCCQ9H4X1 137 aa12.96□□□□□ -0.34
PHGDH-205ENST00000482968 ICMTO60725 284 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 DHRS3O75911 302 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 CD2P06729 351 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 UCHL1P09936 223 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 MAPK3P27361 379 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-205ENST00000482968 BSPH1Q075Z2 132 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 HSD17B12Q53GQ0 312 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 UNQ6126/PRO20091Q6UXV3 157 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 MRPL21Q7Z2W9 205 aaKnown RBP12.95□□□□□ -0.34
PHGDH-205ENST00000482968 SPSB4Q96A44 273 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
PHGDH-205ENST00000482968 OR2J1Q9GZK6 312 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 ZNF391Q9UJN7 358 aa12.95□□□□□ -0.34
PHGDH-205ENST00000482968 ATP6V1G2-DDX39BF2Z307 99 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 J3QW42 95 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 ABCD4O14678 606 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 ARL6IP5O75915 188 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 RNF224P0DH78 156 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SRMP19623 302 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SDC2P34741 201 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 GNALP38405 381 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 GSK3AP49840 483 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 MXD1Q05195 221 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 TNK1Q13470 666 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SEMA6DQ8NFY4 1073 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SLC25A40Q8TBP6 338 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 ADAT3Q96EY9 351 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-205ENST00000482968 BCL2L14Q9BZR8 327 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 PLEKHA1Q9HB21 404 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 PIGLQ9Y2B2 252 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SPEF1Q9Y4P9 236 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 PEX16Q9Y5Y5 336 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 V9GYS6 101 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 TRBV5-7A0A0A0MS05 114 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 hCG_38984A0A1B0GV85 526 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SHISA3A0PJX4 238 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 CASKO14936 926 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 CDRT1O95170 752 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 RAF1P04049 648 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 ZNF20P17024 532 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 CFL1P23528 166 aaKnown RBP12.94□□□□□ -0.34
PHGDH-205ENST00000482968 ACKR3P25106 362 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SOX6P35712 828 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 MAP2K3P46734 347 aa12.94□□□□□ -0.34
PHGDH-205ENST00000482968 SERPINA12Q8IW75 414 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms