RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 THEM6Q8WUY1 208 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 WFDC12Q8WWY7 111 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 TMIGD2Q96BF3 282 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 REEP6Q96HR9 211 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 SIGLEC11Q96RL6 698 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 INTS14Q96SY0 518 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 PKP2Q99959 881 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 YY1AP1Q9H869 796 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 ARL8BQ9NVJ2 186 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 ARMC1Q9NVT9 282 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 MRPL15Q9P015 296 aaKnown RBP5.91□□□□□ -1.46
COL17A1-205ENST00000480127 COMMD3-BMI1R4GMX3 469 aa5.91□□□□□ -1.46
COL17A1-205ENST00000480127 KIR2DS1A0A191URI9 304 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 MDFIC2A0A1B0GVS7 189 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 PRR23D1E9PI22 279 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 F5H0A9 414 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 P2RY10O00398 339 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 GSC2O15499 205 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 NDUFB3O43676 98 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 CST1P01037 141 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 PRR23D2P0DMB1 279 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 NDUFB7P17568 137 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 SPI1P17947 270 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 GSTT1P30711 240 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 DDOSTP39656 456 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 GYS2P54840 703 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 FXYD6P3P58550 94 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 BPIFB3P59826 476 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ARF6P62330 175 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ESRRGP62508 458 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 IL5RAQ01344 420 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 PAX8Q06710 450 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 CRMP1Q14194 572 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 PDCD1Q15116 288 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 SNAI3Q3KNW1 292 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 SPATS1Q496A3 300 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF362Q5T0B9 420 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 OR2T5Q6IEZ7 315 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 C8orf82Q6P1X6 216 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 FIP1L1Q6UN15 594 aaKnown RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 LYPD2Q6UXB3 125 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 RASSF6Q6ZTQ3 369 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 C9orf139Q6ZV77 190 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 SHFQ7M4L6 423 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 THAP5Q7Z6K1 395 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 NAA40Q86UY6 237 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ZBTB46Q86UZ6 589 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ARHGAP24Q8N264 748 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF511Q8NB15 262 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 SLC37A3Q8NCC5 494 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 PAPD5Q8NDF8 572 aaKnown RBP5.9□□□□□ -1.46
COL17A1-205ENST00000480127 OR10G2Q8NGC3 310 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 OR52H1Q8NGJ2 320 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 OR2T29Q8NH02 315 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 TBC1D15Q8TC07 691 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 GIPC3Q8TF64 312 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 LRRC29Q8WV35 223 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 SSMEM1Q8WWF3 244 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 LHX4Q969G2 390 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 MAP6Q96JE9 813 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 DHRS1Q96LJ7 313 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 KCNJ15Q99712 375 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 CITED1Q99966 193 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 RTL8AQ9BWD3 113 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 RASSF4Q9H2L5 321 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 MMP27Q9H306 513 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 DPAGT1Q9H3H5 408 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 MUC13Q9H3R2 512 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 TOR3AQ9H497 397 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 ACTR3BQ9P1U1 418 aa5.9□□□□□ -1.46
COL17A1-205ENST00000480127 DOCK11Q5JSL3 2073 aa5.9□□□□□ -1.47
COL17A1-205ENST00000480127 TANC2Q9HCD6 1990 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 A0A1B0GUS0 222 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 DHRS12A0PJE2 317 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 FAM181BA6NEQ2 426 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 ANKRD61A6NGH8 418 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 FAM183AA6NL82 134 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF879B4DU55 563 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 DVL1O14640 695 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 TIPRLO75663 272 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 ECDO95905 644 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-205ENST00000480127 PLATP00750 562 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 GASTP01350 101 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 SFTPBP07988 381 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 PPIAL4GP0DN37 164 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 GATA4P43694 442 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 GABRA2P47869 451 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 RAG2P55895 527 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 KRTAP10-3P60369 221 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 HIST1H3AP68431 136 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 RELBQ01201 579 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 MAB21L1Q13394 359 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 MICAQ29983 383 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 DEFB112Q30KQ8 113 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 HIST2H3PS2Q5TEC6 136 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 RUSC1-AS1Q66K80 236 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 LYPD4Q6UWN0 246 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF826PQ6ZT77 177 aa5.89□□□□□ -1.47
COL17A1-205ENST00000480127 HIST2H3AQ71DI3 136 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms