RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CD300LGQ6UXG3 332 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 LMX1AQ8TE12 382 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 YIPF5Q969M3 257 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 YIPF6Q96EC8 236 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 RETNLBQ9BQ08 111 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 ACTR3BQ9P1U1 418 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 SH3BGRL2Q9UJC5 107 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 NCKAP5O14513 1909 aa-0.07□□□□□ -2.42
NCKAP1-204ENST00000477988 PDZK1P1A8MUH7 402 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 FGFR1OPO95684 399 aaKnown RBP-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 NAPSAO96009 420 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 SERPIND1P05546 499 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 GZMAP12544 262 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 STMN1P16949 149 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 KITLGP21583 273 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 CDH6P55285 790 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 PPP1CAP62136 330 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 DOC2AQ14183 400 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 CST6Q15828 149 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 C1orf185Q5T7R7 199 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 UBE2UQ5VVX9 321 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 KRTAP19-3Q7Z4W3 81 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 CPNE9Q8IYJ1 553 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 ZNF619Q8N2I2 560 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 C19orf18Q8NEA5 215 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 OR4M2Q8NGB6 313 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 OR5C1Q8NGR4 320 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 OR2T34Q8NGX1 318 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 ENKURQ8TC29 256 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 DCAKDQ8WVC6 231 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 HAUS1Q96CS2 278 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 COQ2Q96H96 371 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 OR8B2Q96RD0 313 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 ATP5SQ99766 215 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 KIR3DX1Q9H7L2 352 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 METTL7AQ9H8H3 244 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 FAM60AQ9NP50 221 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 ZNF443Q9Y2A4 671 aaPredicted RBP-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 HES2Q9Y543 173 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 C2orf16Q68DN1 1984 aa-0.08□□□□□ -2.42
NCKAP1-204ENST00000477988 NYNRINQ9P2P1 1898 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 ERICH4A6NGS2 130 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 SMKR1H3BMG3 65 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 IDH1O75874 414 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 DBTP11182 482 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 ZNF22P17026 224 aaPredicted RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 GGT2P36268 569 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 RAB7AP51149 207 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 ART3Q13508 389 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 IMMTQ16891 758 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 NPSR1Q6W5P4 371 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 Q6ZRU5 148 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 NIPA1Q7RTP0 329 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 Q8NAQ8 132 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 CCDC47Q96A33 483 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 RAD51AP1Q96B01 352 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 S100PBPQ96BU1 408 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 CCDC126Q96EE4 140 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 DERL3Q96Q80 235 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 RAB33BQ9H082 229 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 PLEKHF2Q9H8W4 249 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 NT5MQ9NPB1 228 aa-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 RRAGDQ9NQL2 400 aaPredicted RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 STX18Q9P2W9 335 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 MDC1Q14676 2089 aaKnown RBP-0.09□□□□□ -2.42
NCKAP1-204ENST00000477988 MACF1Q9UPN3 7388 aaKnown RBP-0.1□□□□□ -2.42
NCKAP1-204ENST00000477988 SLC31A1O15431 190 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 COILP38432 576 aaPredicted RBP-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 ERFP50548 548 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 STXBP1P61764 594 aaKnown RBP-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 IFITM3Q01628 133 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 ST3GAL4Q11206 333 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 DHRS2Q13268 280 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 NAB1Q13506 487 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 DDX39BQ13838 428 aaKnown RBP-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 H2BFWTQ7Z2G1 175 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 OR2T3Q8NH03 318 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 PEBP4Q96S96 227 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 SLC29A1Q99808 456 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 PIGUQ9H490 435 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 SND1-IT1Q9HBX3 110 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 ZNF160Q9HCG1 818 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 SLC7A11Q9UPY5 501 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 CCL26Q9Y258 94 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 TRAPPC1Q9Y5R8 145 aa-0.1□□□□□ -2.43
NCKAP1-204ENST00000477988 CCL15-CCL14A0A0B4J2E2 113 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 A0A1B0GU33 70 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 SNTNA6NMZ2 147 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 IGLL5B9A064 214 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 ZNF189O75820 626 aaPredicted RBP-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 FLOT1O75955 427 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 TSPAN12O95859 305 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 SEC11BP0C7V7 166 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 RGS6P49758 472 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 CCL15Q16663 113 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 TMEM176BQ3YBM2 270 aaPredicted RBP-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 RIPPLY2Q5TAB7 128 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 SLC25A25Q6KCM7 469 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 METAP1DQ6UB28 335 aaPredicted RBP-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms