RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CROCC2H7BZ55 1655 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 YTHDC2Q9H6S0 1430 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 ADGRL3Q9HAR2 1447 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM131LA2VDJ0 1609 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 IQGAP3Q86VI3 1631 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 EPM2AB3EWF7 344 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 GOLGA8KD6RF30 607 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 H3BNH8 94 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 GOLGA8MH3BSY2 632 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 CLDN34H7C241 214 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 H7C423 109 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 GATCO43716 136 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 DEXIO95424 95 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 AHSA1O95433 338 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 RNF224P0DH78 156 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 PGA4P0DJD7 388 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 PGA3P0DJD8 388 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 HSPD1P10809 573 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 MAGEA2P43356 314 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 PRELPP51888 382 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 VSX2P58304 361 aaPredicted RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 TAS2R39P59534 338 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 RPS21P63220 83 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 RAB31Q13636 194 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 FZD2Q14332 565 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 GUSBP1Q15486 140 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 PRR4Q16378 134 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 CCDC14Q49A88 953 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 GCSAMLQ5JQS6 135 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 BAIAP2L2Q6UXY1 529 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 NPSR1Q6W5P4 371 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM61Q8N0U2 210 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 PNKDQ8N490 385 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 OR2Y1Q8NGV0 311 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 OR5AK3PQ8NH89 298 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 CDC26Q8NHZ8 85 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 CHMP6Q96FZ7 201 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 ARHGDIGQ99819 225 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 POTEKPQ9BYX7 375 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 SHCBP1LQ9BZQ2 653 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 TRIM15Q9C019 465 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 DSN1Q9H410 356 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 LRRC19Q9H756 370 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 WDR54Q9H977 334 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 USE1Q9NZ43 259 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 CLCF1Q9UBD9 225 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 APOBEC3BQ9UH17 382 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 KCNE3Q9Y6H6 103 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 NKTRP30414 1462 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 C1orf167Q5SNV9 1468 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 PREX1Q8TCU6 1659 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 LRP6O75581 1613 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 COL22A1Q8NFW1 1626 aaPredicted RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 ABCB11O95342 1321 aa3.19□□□□□ -1.9
VPS13D-207ENST00000476169 USP42Q9H9J4 1324 aaKnown RBP3.19□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF142P52746 1687 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TRAV39A0A0B4J263 110 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 IGHV3-35A0A0C4DH35 117 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 ERI2A8K979 691 aaKnown RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 XKRYO14609 159 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 KMOO15229 486 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PHF1O43189 567 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PSMG1O95456 288 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 C6orf47O95873 294 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 IGHV3-48P01763 117 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 SEMG1P04279 462 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 HPNP05981 417 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 SMIM10L1P0DMW3 83 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PVALBP20472 110 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 MAGP20916 626 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 MYL9P24844 172 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 HLA-DMAP28067 261 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PFN2P35080 140 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PPICP45877 212 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 GALR1P47211 349 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TUFMP49411 452 aaKnown RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 RGS19P49795 217 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 UBE2E1P51965 193 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PRPS1P60891 318 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 HMGCS1Q01581 520 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 RPL18AQ02543 176 aaKnown RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 REG3AQ06141 175 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 QPRTQ15274 297 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TRAM1Q15629 374 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TRIP13Q15645 432 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 NSDHLQ15738 373 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 ZBTB6Q15916 424 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 GSG1Q2KHT4 349 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TIMM50Q3ZCQ8 353 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PRR30Q53SZ7 412 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 LRRC10Q5BKY1 277 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TFDP3Q5H9I0 405 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PAGE3Q5JUK9 113 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 FRMPD2BQ6IN97 320 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 FAAP20Q6NZ36 180 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 C8orf74Q6P047 294 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 P2RY8Q86VZ1 359 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 Q8N377 158 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 LRRC52Q8N7C0 313 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms