RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 RPS25P62851 125 aaKnown RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PPP3R1P63098 170 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 RIPPLY1Q0D2K3 151 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 LSAMPQ13449 338 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PABPC1L2AQ5JQF8 200 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 WDR38Q5JTN6 314 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 FOXB2Q5VYV0 432 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 C22orf42Q6IC83 251 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 TMEM91Q6ZNR0 172 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CFAP77Q6ZQR2 320 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 COLCA1Q6ZS62 124 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 SEM1Q6ZVN7 128 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 LINGO2Q7L985 606 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 BHLHA15Q7RTS1 189 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 WDFY1Q8IWB7 410 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PRSS35Q8N3Z0 413 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PARP16Q8N5Y8 322 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NKAIN3Q8N8D7 197 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PLPP7Q8NBV4 271 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CSNK2A3Q8NEV1 391 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 DYNC2LI1Q8TCX1 351 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 SMAP2Q8WU79 429 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PP6455Q8WZ26 134 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NRGNQ92686 78 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 TMEM106AQ96A25 262 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 FOXN4Q96NZ1 517 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 AMELYQ99218 206 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PDCD1LG2Q9BQ51 273 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CENPOQ9BU64 300 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 BCL2L14Q9BZR8 327 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NXF2Q9GZY0 626 aaKnown RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 WNT5BQ9H1J7 359 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 GSX1Q9H4S2 264 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 DLL4Q9NR61 685 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 JKAMPQ9P055 326 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NDRG3Q9UGV2 375 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 GTF2A1LQ9UNN4 478 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NOP16Q9Y3C1 178 aaKnown RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 SIRT4Q9Y6E7 314 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 EXPH5Q8NEV8 1989 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 A0A096LPE4 126 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 TRBV5-7A0A0A0MS05 114 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 A0A1W2PPW3 197 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 A0A1W2PPZ6 126 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 H3BUI4 141 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 PSMD9O00233 223 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 TPD52L2O43399 206 aaKnown RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 ICMTO60725 284 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 CTAG2O75638 210 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 PNPP00491 289 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 IGHV3-9P01782 118 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 ACSM4P0C7M7 580 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 CD37P11049 281 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF20P17024 532 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 PRKACBP22694 351 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 VAMP1P23763 118 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 PTBP1P26599 531 aaKnown RBP eCLIP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 CALRP27797 417 aaKnown RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SDC2P34741 201 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 RPS19P39019 145 aaKnown RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 CD79BP40259 229 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SELENOVP59797 346 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 NCS1P62166 190 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 RPS11P62280 158 aaKnown RBP eCLIP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 LSM3P62310 102 aaKnown RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF45Q02386 682 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 MZT1Q08AG7 82 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 FBXL19-AS1Q494R0 122 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF774Q6NX45 483 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 METAP1DQ6UB28 335 aaPredicted RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 UTS2BQ765I0 119 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SPATC1Q76KD6 591 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 KRT74Q7RTS7 529 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 PRSS45Q7RTY3 260 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 BIVMQ86UB2 503 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 GCNT2Q8N0V5 402 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 ZFP41Q8N8Y5 198 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SEMA6DQ8NFY4 1073 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 OR10S1Q8NGN2 331 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 OR13C3Q8NGS6 347 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 MCFD2Q8NI22 146 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 TSEN15Q8WW01 171 aaKnown RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SPSB4Q96A44 273 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SGK3Q96BR1 496 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 RADILQ96JH8 1075 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 POM121L2Q96KW2 1035 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 CEP19Q96LK0 163 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 DERL3Q96Q80 235 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 HIST1H2AAQ96QV6 131 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 UQCC2Q9BRT2 126 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 NAA50Q9GZZ1 169 aaKnown RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 SLC22A4Q9H015 551 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 TPK1Q9H3S4 243 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 CDH20Q9HBT6 801 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 HMG20AQ9NP66 347 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 TMEM138Q9NPI0 162 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 GHRLQ9UBU3 117 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 FBXO9Q9UK97 447 aaPredicted RBP6.09□□□□□ -1.43
SHQ1-207ENST00000475558 GRIP1Q9Y3R0 1128 aa6.09□□□□□ -1.43
SHQ1-207ENST00000475558 V9GY05 133 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms