RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SPIN3Q5JUX0 258 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 WDR82Q6UXN9 313 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 UNC93AQ86WB7 457 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 MICU2Q8IYU8 434 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 VKORC1L1Q8N0U8 176 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 GPR26Q8NDV2 337 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 CDS1Q92903 461 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 RPEQ96AT9 228 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 WDR34Q96EX3 536 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 KCNS1Q96KK3 526 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 COL21A1Q96P44 957 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 MARVELD1Q9BSK0 173 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 NUDT9Q9BW91 350 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 GEMIN7Q9H840 131 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 ANKRA2Q9H9E1 313 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 DHCR7Q9UBM7 475 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 HMGXB4Q9UGU5 601 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 LRRC42Q9Y546 428 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 SCN1AP35498 2009 aa1.57□□□□□ -2.16
ECHDC1-213ENST00000474240 DENND4AQ7Z401 1863 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 GPR179Q6PRD1 2367 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 ANKRD65E5RJM6 399 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 K7EM74 188 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SLC9A3R1O14745 358 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 EIF3HO15372 352 aaKnown RBP eCLIP1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 XRCC2O43543 280 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SLC16A7O60669 478 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 PGA5P0DJD9 388 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 CTRB1P17538 263 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 NTF3P20783 257 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 RFC3P40938 356 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 NUDT2P50583 147 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 TAS2R43P59537 309 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 RBX1P62877 108 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 ILKQ13418 452 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 IL18Q14116 193 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 MAPRE2Q15555 327 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF664Q8N3J9 261 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 OR4M2Q8NGB6 313 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 OR52N1Q8NH53 320 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 CMTM2Q8TAZ6 248 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 NRGNQ92686 78 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SGTBQ96EQ0 304 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 MRPL48Q96GC5 212 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SNF8Q96H20 258 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SEC22CQ9BRL7 303 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SFXN3Q9BWM7 321 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 IQCGQ9H095 443 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 BEX1Q9HBH7 125 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 TREX1Q9NSU2 369 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 MRPL22Q9NWU5 206 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 TAS2R1Q9NYW7 299 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 ADA2Q9NZK5 511 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 SIGLEC7Q9Y286 467 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
ECHDC1-213ENST00000474240 A0A1W2PRD5 423 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 C16orf90A8MZG2 172 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 GABRPO00591 440 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 NME4O00746 187 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 CASQ2O14958 399 aaPredicted RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 NMT2O60551 498 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 HSBP1O75506 76 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 LCA5LO95447 670 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 PGA4P0DJD7 388 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 PGA3P0DJD8 388 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 NELFEP18615 380 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 PRKACBP22694 351 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 COL8A2P25067 703 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 PRSS3P35030 304 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 PPP1CAP62136 330 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 YWHAEP62258 255 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF235Q14590 738 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 APOBEC3HQ6NTF7 200 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF547Q8IVP9 402 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 RNF10Q8N5U6 811 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 SFXN5Q8TD22 340 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 ASZ1Q8WWH4 475 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 GHSRQ92847 366 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 RAB1CQ92928 201 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 YIPF5Q969M3 257 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 TMEM159Q96B96 161 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 ZBED3Q96IU2 234 aaPredicted RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 C9orf72Q96LT7 481 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 OPALINQ96PE5 141 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 EXO5Q9H790 373 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 AUNIPQ9H7T9 357 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 MRPS30Q9NP92 439 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF391Q9UJN7 358 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 YARS2Q9Y2Z4 477 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 RRP15Q9Y3B9 282 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 UBN2Q6ZU65 1347 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 PCDH11XQ9BZA7 1347 aa1.55□□□□□ -2.16
ECHDC1-213ENST00000474240 DOCK8Q8NF50 2099 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 OR2AG2A6NM03 316 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 M0R1X1 148 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 WRBO00258 174 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 PSPHP1O15172 72 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 ERI3O43414 337 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms