RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 UBAC2Q8NBM4 344 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR13H1Q8NG92 308 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR52N4Q8NGI2 321 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR4A4PQ8NGN8 299 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 ZNF721Q8TF20 911 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 KLHDC7BQ96G42 594 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 CNTNAP3Q9BZ76 1288 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 PLA2G2FQ9BZM2 168 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 WWTR1Q9GZV5 400 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 LPAR5Q9H1C0 372 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 LANCL2Q9NS86 450 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 NSG2Q9Y328 171 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 TRIOO75962 3097 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 IGKV3D-11A0A0A0MRZ8 115 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 BTBD17A6NE02 478 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 B4DGG1 531 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 SMAD9O15198 467 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 GPANK1O95872 356 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 IGHG1P01857 330 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 TTRP02766 147 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 CTSDP07339 412 aaPredicted RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 THEGLP0DJG4 465 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 MUC1P15941 1255 aaPredicted RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 COL9A1P20849 921 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 FBLP22087 321 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 THBS4P35443 961 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 ALDH3B1P43353 468 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 CLRN1P58418 232 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 RAB2AP61019 212 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 ERV3-1Q14264 604 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR7A5Q15622 319 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 FAM109BQ6ICB4 259 aaPredicted RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 COX15Q7KZN9 410 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 SULF2Q8IWU5 870 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 PAQR4Q8N4S7 273 aaPredicted RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR1N1Q8NGS0 311 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR13C9Q8NGT0 318 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 MALSU1Q96EH3 234 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 SLC7A5P2Q9GIP4 190 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 RHBDD3Q9Y3P4 386 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 TIMM10BQ9Y5J6 103 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 FTCDNL1E5RQL4 147 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 YKT6O15498 198 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 TGOLN2O43493 480 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 GATCO43716 136 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 CCL1P22362 96 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 SRPXP78539 464 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 SLC9A3R2Q15599 337 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 UEVLDQ8IX04 471 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 GVQW1Q8N7I0 195 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 BOLLQ8N9W6 283 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR8G5Q8NG78 346 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 SLC25A43Q8WUT9 341 aaPredicted RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 PATE1Q8WXA2 126 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 PP6455Q8WZ26 134 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 NTNG2Q96CW9 530 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 C5orf66Q9H5L9 145 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 EHFQ9NZC4 300 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 TUBD1Q9UJT1 453 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 OSGIN2Q9Y236 505 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 CELSR3Q9NYQ7 3312 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 FANCMQ8IYD8 2048 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 A0A1B0GW64 132 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 SSX5O60225 188 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 LRP3O75074 770 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CRTAPO75718 401 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 DDAH2O95865 285 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CHATP28329 748 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CTHP32929 405 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 NPY4RP50391 375 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 AKR1C2P52895 323 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CD81P60033 236 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 POU3F1Q03052 451 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 AKR1C1Q04828 323 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 RAB32Q13637 225 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 IAH1Q2TAA2 248 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 MST1LQ2TV78 715 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 Q6ZRG5 221 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 OR51T1Q8NGJ9 327 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 LYPD6BQ8NI32 183 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 C14orf79Q96F83 325 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 TGM7Q96PF1 710 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 PRRX2Q99811 253 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 SYT3Q9BQG1 590 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 OR51M1Q9H341 326 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 RPS10P5Q9NQ39 176 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 TMEM131Q92545 1883 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 LRP4O75096 1905 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 COLCA2A8K830 154 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 GPR137BO60478 399 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 ZNF354AO60765 605 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 FABP1P07148 127 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 SFTPBP07988 381 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 FCGR3AP08637 254 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 PRF1P14222 555 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 RCC1P18754 421 aaPredicted RBP5.43□□□□□ -1.54
HERC4-209ENST00000473533 FCGR2CP31995 323 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 CD80P33681 288 aa5.43□□□□□ -1.54
HERC4-209ENST00000473533 PTGFRP43088 359 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms