RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 VPS33AQ96AX1 596 aa8.14□□□□□ -1.11
CDHR3-209ENST00000472116 RERGLQ9H628 205 aa8.14□□□□□ -1.11
CDHR3-209ENST00000472116 GRPEL1Q9HAV7 217 aa8.14□□□□□ -1.11
CDHR3-209ENST00000472116 MEPEQ9NQ76 525 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-209ENST00000472116 AIG1Q9NVV5 245 aa8.14□□□□□ -1.11
CDHR3-209ENST00000472116 HAO2Q9NYQ3 351 aa8.14□□□□□ -1.11
CDHR3-209ENST00000472116 LYVE1Q9Y5Y7 322 aa8.14□□□□□ -1.11
CDHR3-209ENST00000472116 FAM90A8PA6NJQ4 464 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 F5H5K5 113 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 H7C1C5 153 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 RHBDL1O75783 438 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 FAM153BP0C7A2 387 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 IL12AP29459 219 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 INSL3P51460 131 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 CAPZA1P52907 286 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
CDHR3-209ENST00000472116 LCN6P62502 163 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 SPIBQ01892 262 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 CKAP4Q07065 602 aaKnown RBP8.13□□□□□ -1.11
CDHR3-209ENST00000472116 SCARB2Q14108 478 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 DGUOKQ16854 277 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 KIRREL3Q8IZU9 778 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 DYNAPQ8N1N2 210 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 LNX2Q8N448 690 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 C11orf42Q8N5U0 333 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 SMYD1Q8NB12 490 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 TMEM185AQ8NFB2 350 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 OR6T1Q8NGN1 323 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 WFDC6Q9BQY6 131 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 ZNF426Q9BUY5 554 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 WDR55Q9H6Y2 383 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-209ENST00000472116 LIN7BQ9HAP6 207 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 SNTG1Q9NSN8 517 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 VNN3Q9NY84 501 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 USE1Q9NZ43 259 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 RPS6KA6Q9UK32 745 aa8.13□□□□□ -1.11
CDHR3-209ENST00000472116 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 IGLV1-36A0A0B4J1U3 117 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 TEX13CA0A0J9YWL9 993 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SMIM23A6NLE4 172 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ANKRD30BLA7E2S9 258 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SIGLEC5O15389 551 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 TIPRLO75663 272 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ALDOCP09972 364 aaKnown RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 PGA5P0DJD9 388 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 CTLA4P16410 223 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 GNALP38405 381 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 RBM34P42696 430 aaKnown RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 GABRA2P47869 451 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ARHGDIBP52566 201 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SLC25A1P53007 311 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SLC35B1P78383 322 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 DYNC1I2Q13409 638 aaKnown RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 MPP2Q14168 576 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 OGFOD2Q6N063 350 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 WDR82Q6UXN9 313 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ZNF782Q6ZMW2 699 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ZNF788Q6ZQV5 615 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 C18orf65Q6ZTR6 163 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 MSANTD1Q6ZTZ1 278 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ZNF329Q86UD4 541 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 GLB1L2Q8IW92 636 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 OR13D1Q8NGV5 346 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 PFN4Q8NHR9 129 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SEH1LQ96EE3 360 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 RNFT2Q96EX2 444 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 APOPT1Q96IL0 206 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 GAFA1Q96PS6 74 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 CDRT15Q96T59 188 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SPATA25Q9BR10 227 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 ELL3Q9HB65 397 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 GRHPRQ9UBQ7 328 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SCOCQ9UIL1 159 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 LRP12Q9Y561 859 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 SIRT4Q9Y6E7 314 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 TNCP24821 2201 aa8.12□□□□□ -1.11
CDHR3-209ENST00000472116 PLECQ15149 4684 aaKnown RBP8.12□□□□□ -1.11
CDHR3-209ENST00000472116 KHDRBS3O75525 346 aaKnown RBP8.11□□□□□ -1.11
CDHR3-209ENST00000472116 LYPD3O95274 346 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 ACSM4P0C7M7 580 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 AMY2BP19961 511 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 SDHAP31040 664 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 OR3A4PP47883 348 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 IL18R1Q13478 541 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 SEC23BQ15437 767 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 OTPQ5XKR4 325 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-209ENST00000472116 COMMD1Q8N668 190 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 ZNF781Q8N8C0 355 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 OR4Q3Q8NH05 313 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 CHPT1Q8WUD6 406 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 LIPHQ8WWY8 451 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 STMN2Q93045 179 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 RAX2Q96IS3 184 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 MED31Q9Y3C7 131 aa8.11□□□□□ -1.11
CDHR3-209ENST00000472116 HILPDAQ9Y5L2 63 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms