RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 CCDC160A6NGH7 325 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 CALRP27797 417 aaKnown RBP16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 LOXP28300 417 aaPredicted RBP16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 MAP2K3P46734 347 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 SOX2P48431 317 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 LSM3P62310 102 aaKnown RBP16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 RIPPLY1Q0D2K3 151 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 SEMA6DQ8NFY4 1073 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 LINC01560Q8TB33 94 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 PP6455Q8WZ26 134 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 ADAT3Q96EY9 351 aaPredicted RBP16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 RADILQ96JH8 1075 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 ESRP2Q9H6T0 727 aaKnown RBP16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 SNTG1Q9NSN8 517 aa16.71■□□□□ 0.27
CHMP2B-204ENST00000472024 LMX1BO60663 402 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 PLA2G2AP14555 144 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 SRMP19623 302 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 CFPP27918 469 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 TGFBR1P36897 503 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 RPS23P62266 143 aaKnown RBP16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 BSPH1Q075Z2 132 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 BEX5Q5H9J7 111 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 PGAP1Q75T13 922 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 LRRTM1Q86UE6 522 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 COMMD2Q86X83 199 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 SERPINA12Q8IW75 414 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 CSNK2A3Q8NEV1 391 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 OR1J1Q8NGS3 322 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 NDNFQ8TB73 568 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 SLC25A40Q8TBP6 338 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 DYNC2LI1Q8TCX1 351 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 PIGTQ969N2 578 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 FGGYQ96C11 551 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 HAVCR1Q96D42 359 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 ZC3HAV1LQ96H79 300 aaKnown RBP16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 TMEM204Q9BSN7 226 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 CHST5Q9GZS9 411 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 DCSTAMPQ9H295 470 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 ZCCHC4Q9H5U6 513 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 ZNF442Q9H7R0 627 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 PTTG3PQ9NZH4 202 aa16.7■□□□□ 0.26
CHMP2B-204ENST00000472024 A0A1B0GWJ7 208 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 ANKRD61A6NGH8 418 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 DEFB108AA8MXU0 73 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 CST4P01036 141 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 FAM157BP0CG42 384 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 ZNF250P15622 560 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 SELEP16581 610 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 KITLGP21583 273 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 MYL9P24844 172 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 GFOD2Q3B7J2 385 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 MRPL21Q7Z2W9 205 aaKnown RBP16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 DMRTC2Q8IXT2 367 aaPredicted RBP16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 KLF14Q8TD94 323 aaPredicted RBP16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 FAM222BQ8WU58 562 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 TMEM171Q8WVE6 324 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 OR2J1Q9GZK6 312 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 PLCE1Q9P212 2302 aa16.69■□□□□ 0.26
CHMP2B-204ENST00000472024 SETXQ7Z333 2677 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 TRAV8-7A0A075B6U6 113 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 ZNF816-ZNF321PA0A0X1KG74 233 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 A0A1W2PPW3 197 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 CD300LBA8K4G0 201 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 IQCF6A8MYZ5 107 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 ATP6V1G2-DDX39BF2Z307 99 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 SIAH2O43255 324 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 TMEM127O75204 238 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 GOSR1O95249 250 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 RNF224P0DH78 156 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 SDC2P34741 201 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 SPOCK1Q08629 439 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 SNTB2Q13425 540 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 HLXQ14774 488 aaPredicted RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 CNPY1Q3B7I2 92 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 CEP78Q5JTW2 689 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 LYPD6Q86Y78 171 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 CDH26Q8IXH8 852 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 OR5D14Q8NGL3 314 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 UBASH3BQ8TF42 649 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 SSC4DQ8WTU2 575 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 SLC25A46Q96AG3 418 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 TECTBQ96PL2 329 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 HEATR1Q9H583 2144 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 PLEKHA1Q9HB21 404 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 CCDC59Q9P031 241 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 CKLFQ9UBR5 152 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 PIGLQ9Y2B2 252 aa16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 GCN1Q92616 2671 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-204ENST00000472024 IGLV3-9A0A075B6K5 115 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 A0A0G2JK05 382 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 A0A1W2PPK0 400 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 C19orf84I3L1E1 186 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 ABCD4O14678 606 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 ALDOBP05062 364 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 FAHP16930 419 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 ZNF20P17024 532 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 ADRA2CP18825 462 aa16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 RPS19P39019 145 aaKnown RBP16.67■□□□□ 0.26
CHMP2B-204ENST00000472024 SERPINB10P48595 397 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms