RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 OR5AK2Q8NH90 309 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 REEP6Q96HR9 211 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 MOV10Q9HCE1 1003 aaKnown RBP8.44□□□□□ -1.06
SF3A1-207ENST00000471342 CA10Q9NS85 328 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 NDRG3Q9UGV2 375 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 ENPP5Q9UJA9 477 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 PURGQ9UJV8 347 aaKnown RBP8.44□□□□□ -1.06
SF3A1-207ENST00000471342 FZR1Q9UM11 496 aa8.44□□□□□ -1.06
SF3A1-207ENST00000471342 CELSR2Q9HCU4 2923 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 IGKV1-27A0A075B6S5 117 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 DHRS7CA6NNS2 312 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 CD300LBA8K4G0 201 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF879B4DU55 563 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 PRSS44E7EML9 344 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 H0YL77 283 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 GABRPO00591 440 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 PTBP3O95758 552 aaKnown RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 CST4P01036 141 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 ANXA2P07355 339 aaKnown RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 SOD3P08294 240 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 HSMCR30P0CW71 290 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 RAC2P15153 192 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 GALP22466 123 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 CCNOP22674 350 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 HSD11B1P28845 292 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 SNTB2Q13425 540 aaKnown RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 ACSM3Q53FZ2 586 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 YIF1BQ5BJH7 314 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 BCL2L15Q5TBC7 163 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 OR2T2Q6IF00 324 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 ALKBH2Q6NS38 261 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 ZNF704Q6ZNC4 412 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 HAVCR2Q8TDQ0 301 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 MRPL24Q96A35 216 aaKnown RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 PGAM5Q96HS1 289 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 CYYR1Q96J86 154 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 C1orf147Q96MC9 270 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 OR14A2Q96R54 314 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 TXNL4BQ9NX01 149 aaKnown RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
SF3A1-207ENST00000471342 KCNN3Q9UGI6 736 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 VPS13CQ709C8 3753 aa8.43□□□□□ -1.06
SF3A1-207ENST00000471342 PKDREJQ9NTG1 2253 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 LOC100289279A0A1B0GTE1 492 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 A0A1W2PPK0 400 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 ZSCAN5BA6NJL1 495 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 DHRS3O75911 302 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 ALX3O95076 343 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 ATE1O95260 518 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 CRYAAP02489 173 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 APOC1P02654 83 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 CLEC2LP0C7M8 214 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 UBCP0CG48 685 aaKnown RBP8.42□□□□□ -1.06
SF3A1-207ENST00000471342 FAHP16930 419 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 FSTP19883 344 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 TUBG1P23258 451 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 PMELP40967 661 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 SLC6A9P48067 706 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 NCS1P62166 190 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 HOXA4Q00056 320 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-207ENST00000471342 MAB21L1Q13394 359 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 SPCS2Q15005 226 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 TAF13Q15543 124 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 EFNB3Q15768 340 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 FAM76BQ5HYJ3 339 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 TMEM244Q5VVB8 128 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 DOK3Q7L591 496 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 FAM220AQ7Z4H9 259 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 BIVMQ86UB2 503 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 DTX2Q86UW9 622 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 OR56B2PQ8NGI1 322 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 UFD1Q92890 307 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 SLC25A28Q96A46 364 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 FGGYQ96C11 551 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 PIK3IP1Q96FE7 263 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 FAM71F1Q96KD3 344 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-207ENST00000471342 NKX3-1Q99801 234 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-207ENST00000471342 TMED9Q9BVK6 235 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 BARHL1Q9BZE3 327 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 BCL2L14Q9BZR8 327 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 OR10A2Q9H208 303 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 PLK3Q9H4B4 646 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 RGCCQ9H4X1 137 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 CDH20Q9HBT6 801 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 NOX4Q9NPH5 578 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 TUBG2Q9NRH3 451 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 STUB1Q9UNE7 303 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 PMF1-BGLAPU3KQ54 211 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
SF3A1-207ENST00000471342 PTPN13Q12923 2485 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 OVOL3O00110 214 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 TBX1O43435 398 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 XRCC2O43543 280 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 GMDSO60547 372 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 ADH4P08319 380 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 CFPP27918 469 aa8.41□□□□□ -1.06
SF3A1-207ENST00000471342 HOXC12P31275 282 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms