RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 NMNAT1Q9HAN9 279 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-204ENST00000470191 ELL3Q9HB65 397 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-204ENST00000470191 C14orf119Q9NWQ9 140 aa7.42□□□□□ -1.22
CCDC171-204ENST00000470191 VSX1Q9NZR4 365 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-204ENST00000470191 KAAG1Q9UBP8 84 aa7.42□□□□□ -1.22
CCDC171-204ENST00000470191 ZNF391Q9UJN7 358 aa7.42□□□□□ -1.22
CCDC171-204ENST00000470191 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
CCDC171-204ENST00000470191 H0YAE9 185 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 M0R135 149 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 NDUFB2O95178 105 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 LHBP01229 141 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 IFNA14P01570 189 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 PF4P02776 101 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 TROVE2P10155 538 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC171-204ENST00000470191 PF4V1P10720 104 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 RPS27P42677 84 aaKnown RBP7.41□□□□□ -1.22
CCDC171-204ENST00000470191 GSK3BP49841 420 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 RAB13P51153 203 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 RFX4Q33E94 735 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 ANKDD1AQ495B1 522 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 SLC18B1Q6NT16 456 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 WDR93Q6P2C0 686 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 DNM1P34Q6PK57 102 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 MBOAT2Q6ZWT7 520 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 TSEN54Q7Z6J9 526 aaKnown RBP7.41□□□□□ -1.22
CCDC171-204ENST00000470191 VTCN1Q7Z7D3 282 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 WDR86Q86TI4 376 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 TMEM219Q86XT9 240 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 OR56B2PQ8NGI1 322 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 OR9Q1Q8NGQ5 310 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 DUS3LQ96G46 650 aaKnown RBP7.41□□□□□ -1.22
CCDC171-204ENST00000470191 ZNF799Q96GE5 643 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 TMEM120AQ9BXJ8 343 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 RABEP2Q9H5N1 569 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 RANBP3Q9H6Z4 567 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-204ENST00000470191 PPP1R3EQ9H7J1 279 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 RAB18Q9NP72 206 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 SERTAD4Q9NUC0 356 aa7.41□□□□□ -1.22
CCDC171-204ENST00000470191 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 IGLV1-36A0A0B4J1U3 117 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 HTR3EA5X5Y0 456 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 MEGF11A6BM72 1044 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 NKX6-3A6NJ46 265 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 FFAR1O14842 300 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PPP1R3DO95685 299 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PTBP3O95758 552 aaKnown RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 ZNF682O95780 498 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 IFNW1P05000 195 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 SLC2A1P11166 492 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 MUC1P15941 1255 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 AMY2BP19961 511 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 CRABP1P29762 137 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 KDELR2P33947 212 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 GRK5P34947 590 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PRKXP51817 358 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 BLMHQ13867 455 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 CYLC2Q14093 348 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 TMEM95Q3KNT9 176 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 KRTAP27-1Q3LI81 207 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 NCR3LG1Q68D85 454 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 GPR139Q6DWJ6 353 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 HCP5Q6MZN7 132 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PGM2L1Q6PCE3 622 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 CRIP3Q6Q6R5 217 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 C11orf53Q8IXP5 236 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 OFCC1Q8IZS5 231 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 FAM185AQ8N0U4 392 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PLPP7Q8NBV4 271 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 SLC26A10Q8NG04 563 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 SPTSSAQ969W0 71 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 C7orf26Q96N11 449 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 ERMAPQ96PL5 475 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 NMNAT3Q96T66 252 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 DDOQ99489 341 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PARD6BQ9BYG5 372 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 WDR13Q9H1Z4 485 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 METTL8Q9H825 291 aaKnown RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 RPRD1BQ9NQG5 326 aaKnown RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 SLC25A10Q9UBX3 287 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 B9D1Q9UPM9 204 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 SF3B6Q9Y3B4 125 aaKnown RBP7.4□□□□□ -1.22
CCDC171-204ENST00000470191 PCDHGB5Q9Y5G0 923 aa7.4□□□□□ -1.22
CCDC171-204ENST00000470191 ANKRD30BLA7E2S9 258 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 CDIPTO14735 213 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 TBX1O43435 398 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 RENP00797 406 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 COX7A1P24310 79 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 NAA10P41227 235 aaPredicted RBP7.39□□□□□ -1.23
CCDC171-204ENST00000470191 GABRA2P47869 451 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 TGM4P49221 684 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 RPS6KA3P51812 740 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 SELENOWP63302 87 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 MZT1Q08AG7 82 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 DGUOKQ16854 277 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 C11orf91Q3C1V1 193 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 SLC36A3Q495N2 470 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 FGD3Q5JSP0 725 aa7.39□□□□□ -1.23
CCDC171-204ENST00000470191 WDR82Q6UXN9 313 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms