RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 BTBD17A6NE02 478 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 ABCD4O14678 606 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 SORDQ00796 357 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 PDZK1IP1Q13113 114 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 OR6X1Q8NH79 312 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 CACFD1Q9UGQ2 172 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 OR2M5A3KFT3 312 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 PMP2P02689 132 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 ATF1P18846 271 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 RAB4BP61018 213 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 CNTNAP3Q9BZ76 1288 aa13.51□□□□□ -0.25
LIMS2-213ENST00000469300 M0QYG6 137 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 HS3ST1O14792 307 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 FOXS1O43638 330 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 ANKRD34CP0C6C1 535 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 HIST2H3PS2Q5TEC6 136 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 FBXO34Q9NWN3 711 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 PILRBQ9UKJ0 227 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 TIMM8BQ9Y5J9 83 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-213ENST00000469300 TRBV5-3A0A0A0MS03 114 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 PLPP3O14495 311 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 IFI6P09912 130 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 HOXA1P49639 335 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-213ENST00000469300 ZNF136P52737 540 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 FABP5Q01469 135 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 FXNQ16595 210 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 GAB4Q2WGN9 574 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 CBLN3Q6UW01 205 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 OR2AE1Q8NHA4 323 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 RNF141Q8WVD5 230 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 S1PR3Q99500 378 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 MEIKINA0A087WXM9 373 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 GNG3P63215 75 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 H3F3CQ6NXT2 135 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-213ENST00000469300 EDARADDQ8WWZ3 215 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 DDA1Q9BW61 102 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 LRP12Q9Y561 859 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 SHISA8B8ZZ34 492 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 GZMKP49863 264 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 PLA2G7Q13093 441 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 IAH1Q2TAA2 248 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-213ENST00000469300 ZNF705AQ6ZN79 300 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-213ENST00000469300 BORCS7Q96B45 105 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 C20orf141Q9NUB4 165 aa13.5□□□□□ -0.25
LIMS2-213ENST00000469300 SLC17A2O00624 439 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 MBP02144 154 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 ELK1P19419 428 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 PEBP1P30086 187 aaKnown RBP13.49□□□□□ -0.25
LIMS2-213ENST00000469300 NDUFA6P56556 154 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 UBE2KP61086 200 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 C2orf76Q3KRA6 126 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 DCAF10Q5QP82 559 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 C17orf107Q6ZR85 190 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 SLC22A18ASQ8N1D0 253 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 FBXL14Q8N1E6 418 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 PTPMT1Q8WUK0 201 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-213ENST00000469300 CMTM3Q96MX0 182 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 RP1P56715 2156 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 AHCTF1Q8WYP5 2266 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 EFSO43281 561 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 HAAOP46952 286 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 TOR2AQ5JU69 321 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 FJX1Q86VR8 437 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 OR10Z1Q8NGY1 313 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 GCM1Q9NP62 436 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 MAGEB4O15481 346 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-213ENST00000469300 COTL1Q14019 142 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 KIAA0141Q14154 515 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-213ENST00000469300 PNLIPRP3Q17RR3 467 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 TMEM108Q6UXF1 575 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 RDH5Q92781 318 aa13.49□□□□□ -0.25
LIMS2-213ENST00000469300 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-213ENST00000469300 SERPINE3A8MV23 424 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 A8MXE2 369 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 CLDN1O95832 211 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 OSR2Q8N2R0 312 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 TM4SF19Q96DZ7 209 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 FN3KRPQ9HA64 309 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 TRAV20A0A0B4J274 112 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 FABP1P07148 127 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 ZNF266Q14584 549 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 ADAM5Q6NVV9 412 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 ATG4DQ86TL0 474 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 OR4D6Q8NGJ1 314 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 NANPQ8TBE9 248 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 MCHR2Q969V1 340 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 YIPF6Q96EC8 236 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 VPS25Q9BRG1 176 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 ZNF354AO60765 605 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-213ENST00000469300 IGHA2P01877 340 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 SP9P0CG40 484 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 FGF5P12034 268 aa13.48□□□□□ -0.25
LIMS2-213ENST00000469300 CDAP32320 146 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms