RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 BEND4Q6ZU67 534 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 RNF144BQ7Z419 303 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 MYPOPQ86VE0 399 aaPredicted RBP17.84■□□□□ 0.45
TMEM53-207ENST00000468117 CCDC36Q8IYA8 594 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 GDPD1Q8N9F7 314 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 OR6M1Q8NGM8 313 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 SYNPRQ8TBG9 265 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 CMTM3Q96MX0 182 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 RGCCQ9H4X1 137 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 ETV7Q9Y603 341 aa17.84■□□□□ 0.45
TMEM53-207ENST00000468117 IGKV1-9A0A0C4DH69 117 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 CELA3BP08861 270 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 THBS4P35443 961 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 FAM3AP98173 230 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 PMPCAQ10713 525 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 C2orf76Q3KRA6 126 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 CCDC54Q8NEL0 328 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 C1orf162Q8NEQ5 155 aaPredicted RBP17.83■□□□□ 0.45
TMEM53-207ENST00000468117 SLC30A7Q8NEW0 376 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 OR4D6Q8NGJ1 314 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 CNTD2Q9H8S5 307 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 ZNF391Q9UJN7 358 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 RHBDD3Q9Y3P4 386 aa17.83■□□□□ 0.45
TMEM53-207ENST00000468117 hCG_38984A0A1B0GV85 526 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 XRCC2O43543 280 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 NGFP01138 241 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 ERCC1P07992 297 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 ZNF14P17017 642 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 PTBP1P26599 531 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 PITPNBP48739 271 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 P2RY6Q15077 328 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 C1orf100Q5SVJ3 147 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 Q8N402 240 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 PP6455Q8WZ26 134 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 FOXRED1Q96CU9 486 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 SORCS2Q96PQ0 1159 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 SFXN3Q9BWM7 321 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 CHST5Q9GZS9 411 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 HCKP08631 526 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 CSF3P09919 207 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 IL7P13232 177 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 HOXC12P31275 282 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 ZNF93P35789 620 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 MAP2K3P46734 347 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 GSK3AP49840 483 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 IDH3GP51553 393 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 ART1P52961 327 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 RIPPLY1Q0D2K3 151 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 RIN1Q13671 783 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 UBE2V2Q15819 145 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 ZNF474Q6S9Z5 364 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 IZUMO1Q8IYV9 350 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 ZNF101Q8IZC7 436 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 NPRL2Q8WTW4 380 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 AKAP1Q92667 903 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 APOBEC3DQ96AK3 386 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 C10orf35Q96D05 121 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 METTL17Q9H7H0 456 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 RHBDL2Q9NX52 303 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 MRPS7Q9Y2R9 242 aaKnown RBP17.82■□□□□ 0.44
TMEM53-207ENST00000468117 SHANK1Q9Y566 2161 aa17.82■□□□□ 0.44
TMEM53-207ENST00000468117 LOC100289279A0A1B0GTE1 492 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 DHRS7CA6NNS2 312 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 OCMP0CE72 109 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-207ENST00000468117 ARSBP15848 533 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 WNT5AP41221 380 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 EFNB2P52799 333 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 SCAND1P57086 179 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 NCCRP1Q6ZVX7 275 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-207ENST00000468117 WDR31Q8NA23 367 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 SPSB4Q96A44 273 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 BOD1Q96IK1 185 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 ABHD1Q96SE0 405 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 C1QTNF6Q9BXI9 259 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 ABCG5Q9H222 651 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 HEATR1Q9H583 2144 aaKnown RBP17.81■□□□□ 0.44
TMEM53-207ENST00000468117 ACACBO00763 2458 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 AGFG2O95081 481 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 HOXB1P14653 301 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-207ENST00000468117 GK2Q14410 553 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-207ENST00000468117 OR51B6Q9H340 312 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 MYEF2Q9P2K5 600 aaKnown RBP17.81■□□□□ 0.44
TMEM53-207ENST00000468117 STARD10Q9Y365 291 aa17.81■□□□□ 0.44
TMEM53-207ENST00000468117 TMEM272A0A1B0GTI8 110 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 MAGEB3O15480 346 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 BMP5P22003 454 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 HLXQ14774 488 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-207ENST00000468117 OR8B8Q15620 311 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 UTS2BQ765I0 119 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 BHLHA15Q7RTS1 189 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-207ENST00000468117 S100A16Q96FQ6 103 aaKnown RBP17.8■□□□□ 0.44
TMEM53-207ENST00000468117 UQCC2Q9BRT2 126 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 NBASA2RRP1 2371 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 POLEQ07864 2286 aa17.8■□□□□ 0.44
TMEM53-207ENST00000468117 A0A0G2JNJ9 132 aa17.79■□□□□ 0.44
TMEM53-207ENST00000468117 A0A1W2PQ09 198 aa17.79■□□□□ 0.44
TMEM53-207ENST00000468117 ISPDA4D126 451 aa17.79■□□□□ 0.44
TMEM53-207ENST00000468117 RBPJQ06330 500 aa17.79■□□□□ 0.44
TMEM53-207ENST00000468117 TBC1D28Q2M2D7 210 aa17.79■□□□□ 0.44
TMEM53-207ENST00000468117 RAB40AQ8WXH6 277 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms