RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CCL1P22362 96 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 TNFSF4P23510 183 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 COL8A2P25067 703 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 CD200P41217 278 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 GATA4P43694 442 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 ACTA2P62736 377 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 ACTG2P63267 376 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 LOXL1Q08397 574 aaPredicted RBP9.35□□□□□ -0.91
MSH5-212ENST00000467319 GFOD2Q3B7J2 385 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 TP53I3Q53FA7 332 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 C6orf52Q5T4I8 152 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 BCL2L15Q5TBC7 163 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 FDX2Q6P4F2 183 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 CATSPERDQ86XM0 798 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 KLBQ86Z14 1044 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 EGFL6Q8IUX8 553 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 LURAP1LQ8IV03 231 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 ELMOD2Q8IZ81 293 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 SYS1Q8N2H4 156 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 CELF2-AS1Q8N7Q2 184 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 PLPP7Q8NBV4 271 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 ITLN1Q8WWA0 313 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 MEGF10Q96KG7 1140 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 OR2V2Q96R30 315 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 SIGLEC11Q96RL6 698 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 SOX7Q9BT81 388 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 ADAT1Q9BUB4 502 aaKnown RBP9.35□□□□□ -0.91
MSH5-212ENST00000467319 SLC22A4Q9H015 551 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 VCX3BQ9H321 246 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 FGF20Q9NP95 211 aaPredicted RBP9.35□□□□□ -0.91
MSH5-212ENST00000467319 DECR2Q9NUI1 292 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 ERVK13-1Q9NX77 482 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 NOP16Q9Y3C1 178 aaKnown RBP9.35□□□□□ -0.91
MSH5-212ENST00000467319 N6AMT1Q9Y5N5 214 aa9.35□□□□□ -0.91
MSH5-212ENST00000467319 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 A0A1B0GTI1 187 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 DAPL1A0PJW8 107 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 F5H5P2 479 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 GMDSO60547 372 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 HLA-DPB1P04440 258 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 LIMS3P0CW19 117 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 LIMS4P0CW20 117 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 PIPP12273 146 aaPredicted RBP9.34□□□□□ -0.91
MSH5-212ENST00000467319 ATP6V1B1P15313 513 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 CA6P23280 308 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 KIR3DL2P43630 455 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 HNRNPA0Q13151 305 aaKnown RBP9.34□□□□□ -0.91
MSH5-212ENST00000467319 GALEQ14376 348 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 CARTPTQ16568 116 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 WDR38Q5JTN6 314 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 FAM220AQ7Z4H9 259 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 KCTD20Q7Z5Y7 419 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 THAP5Q7Z6K1 395 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 PRSS35Q8N3Z0 413 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 YIPF7Q8N8F6 280 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 ZNF540Q8NDQ6 660 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 CSNK2A3Q8NEV1 391 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 OR51E1Q8TCB6 317 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 PELI1Q96FA3 418 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 ALG8Q9BVK2 526 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 ANKRD60Q9BZ19 345 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 GCM1Q9NP62 436 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 GPR84Q9NQS5 396 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 PLCXD1Q9NUJ7 323 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 TMEM100Q9NV29 134 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 FKBP14Q9NWM8 211 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 DCAF16Q9NXF7 216 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 GNG8Q9UK08 70 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 OR52A1Q9UKL2 312 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 DIMT1Q9UNQ2 313 aaKnown RBP9.34□□□□□ -0.91
MSH5-212ENST00000467319 SNX5Q9Y5X3 404 aa9.34□□□□□ -0.91
MSH5-212ENST00000467319 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.33□□□□□ -0.926e-17■■■■□ 26.6
MSH5-212ENST00000467319 IRGMA1A4Y4 181 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 DHRS7CA6NNS2 312 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 CLDN25C9JDP6 229 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 TPD52L2O43399 206 aaKnown RBP9.33□□□□□ -0.92
MSH5-212ENST00000467319 CDC14BO60729 498 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 DHRS3O75911 302 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 RPP14O95059 124 aaKnown RBP9.33□□□□□ -0.92
MSH5-212ENST00000467319 CST4P01036 141 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 TNFRSF1AP19438 455 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 USF1P22415 310 aaPredicted RBP9.33□□□□□ -0.92
MSH5-212ENST00000467319 MYF6P23409 242 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 DCKP27707 260 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 HSPA13P48723 471 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 SRP9P49458 86 aaKnown RBP9.33□□□□□ -0.92
MSH5-212ENST00000467319 TMEM33P57088 247 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 OR12D2P58182 307 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 NANOS3P60323 173 aaKnown RBP9.33□□□□□ -0.92
MSH5-212ENST00000467319 MAB21L1Q13394 359 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 SNCBQ16143 134 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 ZNF181Q2M3W8 571 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 KLHL22Q53GT1 634 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 ZBTB37Q5TC79 503 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 WDR86Q86TI4 376 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 BIVMQ86UB2 503 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 Q8TCH9 128 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 HPSE2Q8WWQ2 592 aa9.33□□□□□ -0.92
MSH5-212ENST00000467319 DVL3Q92997 716 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms