RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SDC4P31431 198 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 IFNGR2P38484 337 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CEACAM3P40198 252 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CD200P41217 278 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RPL14P50914 215 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TDGF1P3P51864 188 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ARPP19P56211 112 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RPS20P60866 119 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ST8SIA6P61647 398 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SELENOTP62341 195 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RAB11AP62491 216 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RPS15P62841 145 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CCL7P80098 99 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RPL19P84098 196 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SLC10A7Q0GE19 358 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SPP2Q13103 211 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 NME3Q13232 169 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SERTAD2Q14140 314 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 OR4D1Q15615 310 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RAB11BQ15907 218 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZBTB6Q15916 424 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 GSG1Q2KHT4 349 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM249Q2WGJ8 235 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C18orf21Q32NC0 220 aaPredicted RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FAM74A3Q4VXF1 159 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C9orf135Q5VTT2 229 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 KDM4DQ6B0I6 523 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 LAMTOR1Q6IAA8 161 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 REEP3Q6NUK4 255 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PNCKQ6P2M8 343 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 HAGHLQ6PII5 290 aaPredicted RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RNF165Q6ZSG1 346 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RASSF6Q6ZTQ3 369 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PRSS48Q7RTY5 328 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FAM220AQ7Z4H9 259 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 NAA40Q86UY6 237 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PAQR7Q86WK9 346 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZDHHC21Q8IVQ6 265 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 LAX1Q8IWV1 398 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CPNE9Q8IYJ1 553 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 HS3ST5Q8IZT8 346 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PGAM4Q8N0Y7 254 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 MTURNQ8N3F0 131 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CCNYQ8ND76 341 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM161BQ8NDZ6 487 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 OR9K2Q8NGE7 335 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 OR51D1Q8NGF3 324 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 OR5K1Q8NHB7 308 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TERB2Q8NHR7 220 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CD200R1Q8TD46 325 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CYGBQ8WWM9 190 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SELENOMQ8WWX9 145 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SLC38A4Q969I6 547 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CREB3L1Q96BA8 519 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CPNE2Q96FN4 548 aaPredicted RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 EEF2KMTQ96G04 330 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SLC41A3Q96GZ6 507 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PRAP1Q96NZ9 151 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF382Q96SR6 550 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CMSS1Q9BQ75 279 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 DPH7Q9BTV6 452 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PAXXQ9BUH6 204 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ST6GALNAC5Q9BVH7 336 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ULBP1Q9BZM6 244 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF436Q9C0F3 470 aaPredicted RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF350Q9GZX5 532 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 IL22Q9GZX6 179 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM185BQ9H7F4 350 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RNF122Q9H9V4 155 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FN3KRPQ9HA64 309 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PDFQ9HBH1 243 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 POPDC2Q9HBU9 364 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C6orf50Q9HD87 102 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 POLE4Q9NR33 117 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C1orf109Q9NX04 203 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 VNN3Q9NY84 501 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 MTCH1Q9NZJ7 389 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 IL17CQ9P0M4 197 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ING4Q9UNL4 249 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 HSPB11Q9Y547 144 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ALG6Q9Y672 507 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PARP4Q9UKK3 1724 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 LOXHD1Q8IVV2 1947 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PIK3C2AO00443 1686 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CAMTA1Q9Y6Y1 1673 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZCCHC11Q5TAX3 1644 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ADGRB1O14514 1584 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 MED1Q15648 1581 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 UGGT1Q9NYU2 1555 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SETBP1Q9Y6X0 1596 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 A0A1B0GW55 424 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 E7EWF7 191 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 DFFAO00273 331 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CDX4O14627 284 aaPredicted RBP2.74□□□□□ -1.97
VPS13D-203ENST00000466732 IMPA2O14732 288 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 MRASO14807 208 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 BCKDKO14874 412 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 SLC16A4O15374 487 aa2.74□□□□□ -1.97
VPS13D-203ENST00000466732 CYB5BO43169 146 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms