RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RAB11AP62491 216 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 ZNF33AQ06730 810 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 SIGLEC14Q08ET2 396 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 SLC39A6Q13433 755 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 RBMY1FQ15415 496 aaKnown RBP1.94□□□□□ -2.1
SMC4-205ENST00000465563 RAB11BQ15907 218 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 GABRA6Q16445 453 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 SPIN3Q5JUX0 258 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 TMCO2Q7Z6W1 182 aaPredicted RBP1.94□□□□□ -2.1
SMC4-205ENST00000465563 SPANXA2-OT1Q8N9U9 137 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 SLC25A46Q96AG3 418 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 HAUS1Q96CS2 278 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 FAM19A4Q96LR4 140 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 TIMM29Q9BSF4 260 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 CALN1Q9BXU9 219 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 DEFB129Q9H1M3 183 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 C1orf198Q9H425 327 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 MYOZ1Q9NP98 299 aaPredicted RBP1.94□□□□□ -2.1
SMC4-205ENST00000465563 RRAGDQ9NQL2 400 aaPredicted RBP1.94□□□□□ -2.1
SMC4-205ENST00000465563 RGS18Q9NS28 235 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 MRPL22Q9NWU5 206 aaKnown RBP1.94□□□□□ -2.1
SMC4-205ENST00000465563 RHBDD3Q9Y3P4 386 aa1.94□□□□□ -2.1
SMC4-205ENST00000465563 TRAV6A0A075B6T7 132 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 TMEM120BA0PK00 339 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 GABRR3A8MPY1 467 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 ZNF850A8MQ14 1090 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 SYCE1LA8MT33 242 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 RAD1O60671 282 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 CTNSO60931 367 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 ZNF806P0C7X5 589 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 HTR1DP28221 377 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 MAGEA1P43355 309 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 DAOAP59103 153 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 ZNF616Q08AN1 781 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 PNOCQ13519 176 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 KLHL40Q2TBA0 621 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 ZNF829Q3KNS6 432 aaPredicted RBP1.93□□□□□ -2.1
SMC4-205ENST00000465563 HIKESHIQ53FT3 197 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 PLCXD3Q63HM9 321 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 OTUD6AQ7L8S5 288 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 CMTM8Q8IZV2 173 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 SNX31Q8N9S9 440 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 GATSQ8NAP1 163 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 BBOF1Q8ND07 529 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 C19orf18Q8NEA5 215 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 OR4M1Q8NGD0 313 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 ITFG1Q8TB96 612 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 RAB1CQ92928 201 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 NAT6Q93015 286 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 ISG20Q96AZ6 181 aaKnown RBP1.93□□□□□ -2.1
SMC4-205ENST00000465563 DYNLL2Q96FJ2 89 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 KCNS1Q96KK3 526 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 GPR21Q99679 349 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 DOK1Q99704 481 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 EXOSC4Q9NPD3 245 aaKnown RBP1.93□□□□□ -2.1
SMC4-205ENST00000465563 PXMP2Q9NR77 195 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 PLEKHG2Q9H7P9 1386 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 SEC16AO15027 2179 aa1.93□□□□□ -2.1
SMC4-205ENST00000465563 MUC6Q6W4X9 2439 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 TRAV19A0A0A6YYK7 116 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 A0A1B0GUH1 482 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 SLC22A20A6NK97 555 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 CHST10O43529 356 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 XRCC2O43543 280 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 CDC40O60508 579 aaKnown RBP eCLIP1.92□□□□□ -2.1
SMC4-205ENST00000465563 KRT16P08779 473 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 ZNF688P0C7X2 276 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 RAB5AP20339 215 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 ME2P23368 584 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 OR2B8PP59922 312 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 PPIDQ08752 370 aaKnown RBP1.92□□□□□ -2.1
SMC4-205ENST00000465563 C5orf64Q2M2E5 130 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 UNQ9165/PRO28630Q6UXU0 137 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 TTLQ8NG68 377 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 CSPG4P5Q96PW8 444 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 TEAD3Q99594 435 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 RSG1Q9BU20 258 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 IQCGQ9H095 443 aaKnown RBP1.92□□□□□ -2.1
SMC4-205ENST00000465563 TOLLIPQ9H0E2 274 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 OR2AG1Q9H205 316 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 PLEKHF2Q9H8W4 249 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 TREX1Q9NSU2 369 aa1.92□□□□□ -2.1
SMC4-205ENST00000465563 OR5H1A6NKK0 313 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 SERPINB7O75635 380 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 IGLV2-8P01709 118 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 HLA-DQB1P01920 261 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 RALBP11234 206 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 GFAPP14136 432 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 GPR1P46091 355 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 UBE2E1P51965 193 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 TAS2R39P59534 338 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 TAS2R46P59540 309 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 ATP6V0D1P61421 351 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 CYP24A1Q07973 514 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 DNAJC3Q13217 504 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 TEX30Q5JUR7 227 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 RWDD4Q6NW29 188 aaKnown RBP1.91□□□□□ -2.1
SMC4-205ENST00000465563 RTL4Q6ZR62 310 aa1.91□□□□□ -2.1
SMC4-205ENST00000465563 MRPL21Q7Z2W9 205 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms