RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 RNF166Q96A37 237 aaPredicted RBP17.42■□□□□ 0.38
RPUSD3-210ENST00000460909 GCM1Q9NP62 436 aa17.42■□□□□ 0.38
RPUSD3-210ENST00000460909 DCAF16Q9NXF7 216 aa17.42■□□□□ 0.38
RPUSD3-210ENST00000460909 ABCA2Q9BZC7 2435 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 LRP5LA4QPB2 252 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 LOC110117498-PIK3R3F6TDL0 507 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 WNT9BO14905 357 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 PPIHO43447 177 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 GMDSO60547 372 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 TTRP02766 147 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 HEXAP06865 529 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 CD200P41217 278 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 SRP9P49458 86 aaKnown RBP17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 ACTC1P68032 377 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 ACTA1P68133 377 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 IL18R1Q13478 541 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 ACBD7Q8N6N7 88 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 YIPF7Q8N8F6 280 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 CNIH3Q8TBE1 160 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 RORBQ92753 470 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 PPP1R3CQ9UQK1 317 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 MYRFQ9Y2G1 1151 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 PCDHGB1Q9Y5G3 927 aa17.41■□□□□ 0.38
RPUSD3-210ENST00000460909 ANK3Q12955 4377 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 CLDN25C9JDP6 229 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 RPP14O95059 124 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 PTBP3O95758 552 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 IGHA1P01876 353 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 GATA4P43694 442 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 RAB40BQ12829 278 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 OR8G1Q15617 311 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 CDONQ4KMG0 1287 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 KRT74Q7RTS7 529 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 ELMOD2Q8IZ81 293 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 CELF2-AS1Q8N7Q2 184 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 OR51E1Q8TCB6 317 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 DVL3Q92997 716 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 ZNF649Q9BS31 505 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 ADAT1Q9BUB4 502 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 VCXQ9H320 206 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 PPP1R3EQ9H7J1 279 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 MOB1AQ9H8S9 216 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 GPR84Q9NQS5 396 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 TMEM106BQ9NUM4 274 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 OR52A1Q9UKL2 312 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 RPL36Q9Y3U8 105 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 SNX5Q9Y5X3 404 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 HSPE1-MOB4S4R3N1 261 aa17.4■□□□□ 0.38
RPUSD3-210ENST00000460909 IGHV3-64DA0A0J9YX35 117 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 DAPL1A0PJW8 107 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 H0YHG0 523 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 H0YJX3 145 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 FAM20BO75063 409 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 IL2RGP31785 369 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 PMELP40967 661 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 CHN2P52757 468 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 RIPK1Q13546 671 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 TP53I3Q53FA7 332 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 AVPI1Q5T686 147 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 CATSPERDQ86XM0 798 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 KLBQ86Z14 1044 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 SETD9Q8NE22 299 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 CSNK2A3Q8NEV1 391 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 OR52I1Q8NGK6 324 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 TFAP2CQ92754 450 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 NOP16Q9Y3C1 178 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 RHBDD3Q9Y3P4 386 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 WIPI2Q9Y4P8 454 aa17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 NIPBLQ6KC79 2804 aaeCLIP17.39■□□□□ 0.37
RPUSD3-210ENST00000460909 LOC100289279A0A1B0GTE1 492 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 ANKRD30BLA7E2S9 258 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 IGHV4-31P0DP07 118 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 MVKQ03426 396 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 SLC3A1Q07837 685 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 BCL2L15Q5TBC7 163 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 LAIR2Q6ISS4 152 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 Q6ZSR3 168 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 Q71RC1 249 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 PLPP7Q8NBV4 271 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 CLDND2Q8NHS1 167 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 ZNF420Q8TAQ5 688 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 FBLIM1Q8WUP2 373 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 ITFG2Q969R8 447 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 ACOXLQ9NUZ1 547 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 GNG8Q9UK08 70 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 SLC22A13Q9Y226 551 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 SETD2Q9BYW2 2564 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 NF1P21359 2839 aa17.38■□□□□ 0.37
RPUSD3-210ENST00000460909 A0A1B0GTI1 187 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 CD5LO43866 347 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 FADS2O95864 444 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 CST4P01036 141 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 AQP4P55087 323 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 OR12D2P58182 307 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 MPPED2Q15777 294 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 ZNF181Q2M3W8 571 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 KLHL22Q53GT1 634 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 KCTD20Q7Z5Y7 419 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 LHFPL3Q86UP9 236 aa17.37■□□□□ 0.37
RPUSD3-210ENST00000460909 MOGAT3Q86VF5 341 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms