RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GLIPR1L1Q6UWM5 242 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 RTN4RL2Q86UN3 420 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 KCNG3Q8TAE7 436 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 SRPK3Q9UPE1 567 aa12.18□□□□□ -0.46
PTPRE-204ENST00000455661 A6NIZ1 184 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PLPP3O14495 311 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 TNFRSF10CO14798 259 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 SOCS1O15524 211 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF20P17024 532 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 GLRA1P23415 457 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 GALNSP34059 522 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 TMEM33P57088 247 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 SLC26A5P58743 744 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 RAP1BP61224 184 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 RAP1AP62834 184 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 NCMAPQ5T1S8 102 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 C1orf140Q5VVS0 124 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 C1QL4Q86Z23 238 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 YAF2Q8IY57 180 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 OR13G1Q8NGZ3 307 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 EMG1Q92979 244 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 SMIM3Q9BZL3 60 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 RAB33BQ9H082 229 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PARP12Q9H0J9 701 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 KCNJ16Q9NPI9 418 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 OBP2AQ9NY56 170 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 LUZP4Q9P127 313 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PPP4R1LQ9P1A2 415 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 B3GALT5Q9Y2C3 310 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 MYO7AQ13402 2215 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 TMED7-TICAM2A0A0A6YYA0 188 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 A8MVM7 634 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 SOX1O00570 391 aaPredicted RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PPIHO43447 177 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 IFNA2P01563 188 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 TTRP02766 147 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 ARG1P05089 322 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
PTPRE-204ENST00000455661 TAS2R46P59540 309 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PRTGQ2VWP7 1150 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PLAC9Q5JTB6 97 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 TANGO2Q6ICL3 276 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 GKN2Q86XP6 184 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PRR22Q8IZ63 422 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 CD300LFQ8TDQ1 290 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 FAM131CQ96AQ9 280 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 SLC46A1Q96NT5 459 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PRRX2Q99811 253 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 PBOV1Q9GZY1 135 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 RNF208Q9H0X6 261 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 OPA3Q9H6K4 179 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 FAM206AQ9NX38 181 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 OSGIN2Q9Y236 505 aa12.17□□□□□ -0.46
PTPRE-204ENST00000455661 A0A0A6YYD4 124 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 BORCS7-ASMTA0A0B4J1R7 106 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 NME2P1O60361 137 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 AHSA1O95433 338 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 IFNA21P01568 189 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 IL12BP29460 328 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 CAMLGP49069 296 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 SSTP61278 116 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 CSNK2A1P68400 391 aaPredicted RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 DEFA6Q01524 100 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 PCK2Q16822 640 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 C19orf47Q8N9M1 422 aaKnown RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 FNDC9Q8TBE3 224 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 RNF133Q8WVZ7 376 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 MMABQ96EY8 250 aaPredicted RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 BMFQ96LC9 184 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 TMEM59Q9BXS4 323 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 PLEKHA2Q9HB19 425 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 PNO1Q9NRX1 252 aaKnown RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 AMDHD2Q9Y303 409 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 FRG2CA6NGY1 282 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 CDC14BO60729 498 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 ZNF354AO60765 605 aaPredicted RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 DEDDO75618 318 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 NSA2O95478 260 aaKnown RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 KNG1P01042 644 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 S100A2P29034 98 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 SLC37A1P57057 533 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 AADACL3Q5VUY0 350 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 NSUN5P2Q63ZY6 315 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 AVL9Q8NBF6 648 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 OR10H5Q8NGA6 315 aa12.16□□□□□ -0.46
PTPRE-204ENST00000455661 URM1Q9BTM9 101 aaKnown RBP12.16□□□□□ -0.46
PTPRE-204ENST00000455661 RTN4RQ9BZR6 473 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms