RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 STXBP6Q8NFX7 210 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR4K1Q8NGD4 311 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR52I1Q8NGK6 324 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR8J1Q8NGP2 316 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR1K1Q8NGR3 316 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR2A12Q8NGT7 310 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR11L1Q8NGX0 322 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR6N1Q8NGY5 312 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR51F2Q8NH61 342 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 JOSD2Q8TAC2 188 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 Q8WTZ3 238 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RXFP2Q8WXD0 754 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RAB40AQ8WXH6 277 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ASB17Q8WXJ9 295 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 SORCS1Q8WY21 1168 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 NDRG1Q92597 394 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TMEM106AQ96A25 262 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FAM162AQ96A26 154 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ISOC2Q96AB3 205 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ANKRD9Q96BM1 317 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ACY3Q96HD9 319 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 CAPNS2Q96L46 248 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR7D2Q96RA2 312 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FEVQ99581 238 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 AIF1LQ9BQI0 150 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 VPS25Q9BRG1 176 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 SLC17A9Q9BYT1 436 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ULBP1Q9BZM6 244 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RAB33BQ9H082 229 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FXYD6Q9H0Q3 95 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FN3KRPQ9HA64 309 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ELL3Q9HB65 397 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 POPDC3Q9HBV1 291 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 AMBNQ9NP70 447 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RPS10P5Q9NQ39 176 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 MEPEQ9NQ76 525 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TUBG2Q9NRH3 451 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZCCHC3Q9NUD5 404 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR5AC2Q9NZP5 309 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FLRT1Q9NZU1 646 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 VPS29Q9UBQ0 182 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 DKK2Q9UBU2 259 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF70Q9UC06 446 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 IL20RAQ9UHF4 553 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RNF150Q9ULK6 438 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 YARS2Q9Y2Z4 477 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 AMDHD2Q9Y303 409 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 GREB1Q4ZG55 1949 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 COL18A1P39060 1754 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TRAV8-7A0A075B6U6 113 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 A0A087WZY1 265 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 TRAV1-2A0A0B4J238 106 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 A0A0G2JN53 185 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 SMIM35A0A1B0GVV1 85 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 A0A1W2PNV4 684 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 A0A1W2PPE2 198 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 C2CD4BA6NLJ0 364 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 GJE1A6NN92 205 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 C17orf100A8MU93 164 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 HIDE1A8MVS5 230 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF705EA8MWA4 302 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 VWC2LB2RUY7 222 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 G3V4G9 280 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 KLRC4-KLRK1H3BQV0 150 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 J3QRE1 110 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CORTO00230 105 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 ARPC1BO15143 372 aaKnown RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 DUSP11O75319 330 aaKnown RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 MTX2O75431 263 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 NDUFS3O75489 264 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 FARS2O95363 451 aaKnown RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR2C1O95371 312 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 PPP1R3DO95685 299 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 MT-ND4P03905 459 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 F7P08709 466 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CXCL1P09341 107 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 SLC35G6P0C7Q6 338 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 LIMS3P0CW19 117 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 LIMS4P0CW20 117 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CTSAP10619 480 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 UROSP10746 265 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 ESDP10768 282 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 F3P13726 295 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 PGAM2P15259 253 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 ATF1P18846 271 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 PTNP21246 168 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF10P21506 573 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 BMP5P22003 454 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CHATP28329 748 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CTGFP29279 349 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR10J1P30954 320 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CORO1AP31146 461 aaKnown RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 TLX1P31314 330 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 KDELR2P33947 212 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CHI3L1P36222 383 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CTRLP40313 264 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR3A2P47893 321 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 RPL29P47914 159 aaKnown RBP3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 CAMLGP49069 296 aa3.19□□□□□ -1.9
HMGB3P8-201ENST00000449709 PTH2RP49190 550 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms