RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 OR52N5Q8NH56 324 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 GPX8Q8TED1 209 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 INTS12Q96CB8 462 aaKnown RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF251Q9BRH9 671 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 NAA11Q9BSU3 229 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 RPP25Q9BUL9 199 aaKnown RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 HDAC8Q9BY41 377 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 ESRP2Q9H6T0 727 aaKnown RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 TUBG2Q9NRH3 451 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 KLHL13Q9P2N7 655 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 A0A0G2JMZ2 1700 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 LRRC37A2A6NM11 1700 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 NKX2-2O95096 273 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 HLA-HP01893 362 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 TMEM176BQ3YBM2 270 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 PABPC1L2AQ5JQF8 200 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 OR2T2Q6IF00 324 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 PRSS35Q8N3Z0 413 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 OR56B1Q8NGI3 324 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 ASB5Q8WWX0 329 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 LPAR3Q9UBY5 353 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 SUSD2Q9UGT4 822 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 HMGB3O15347 200 aaKnown RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 IFNA5P01569 189 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 GUSBP08236 651 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 HLA-DOBP13765 273 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 S100GP29377 79 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 EIF2S3P41091 472 aaKnown RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 KIR3DL2P43630 455 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 MPPED2Q15777 294 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 C2orf50Q96LR7 162 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 FOXQ1Q9C009 403 aa11.11□□□□□ -0.63
UBE3B-204ENST00000449510 THAP10Q9P2Z0 257 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-204ENST00000449510 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 A0A1W2PPC1 479 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 TRAPPC6AO75865 159 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 ONECUT2O95948 504 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 BLKP51451 505 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 B2MP61769 119 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 EGR3Q06889 387 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 RIPPLY1Q0D2K3 151 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 RSPO4Q2I0M5 234 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-204ENST00000449510 SLC36A1Q7Z2H8 476 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 PPP1R3BQ86XI6 285 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 PLPP5Q8NEB5 264 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 TEX101Q9BY14 249 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 KCNS2Q9ULS6 477 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 FLVCR1Q9Y5Y0 555 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 JTBO76095 146 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 MYF5P13349 255 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 RRADP55042 308 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 RAET1LQ5VY80 246 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 C5orf46Q6UWT4 87 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 C7orf61Q8IZ16 206 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 GPR137CQ8N3F9 429 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 LCORQ96JN0 433 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-204ENST00000449510 GFI1Q99684 422 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 KCNK7Q9Y2U2 307 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 LTBP4Q8N2S1 1624 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 H3BMH7 237 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 SULT2B1O00204 365 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 KLF4O43474 513 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 NDUFS6O75380 124 aaKnown RBP11.1□□□□□ -0.63
UBE3B-204ENST00000449510 UPK3AO75631 287 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 DUS4LO95620 317 aaKnown RBP11.1□□□□□ -0.63
UBE3B-204ENST00000449510 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBE3B-204ENST00000449510 OR3A4PP47883 348 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 POLR2GP62487 172 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 OR13C8Q8NGS7 320 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 COX14Q96I36 57 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
UBE3B-204ENST00000449510 LINC01553A4QN01 128 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SEMA4FO95754 770 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 LPAR6P43657 344 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 PIGPP57054 158 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 ADIRFQ15847 76 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 LILRA6Q6PI73 481 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 C19orf47Q8N9M1 422 aaKnown RBP11.09□□□□□ -0.63
UBE3B-204ENST00000449510 BHLHE23Q8NDY6 225 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SPPL3Q8TCT6 385 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SDSLQ96GA7 329 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SARGQ9BW04 601 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 NMNAT2Q9BZQ4 307 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 ALKBH4Q9NXW9 302 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 TIMM8BQ9Y5J9 83 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-204ENST00000449510 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 SPTA1P02549 2419 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 ZNF728P0DKX0 622 aa11.09□□□□□ -0.63
UBE3B-204ENST00000449510 GSK3AP49840 483 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms