RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GPR18Q14330 331 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 MITD1Q8WV92 249 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 MUCL1Q96DR8 90 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 SCGB3A2Q96PL1 93 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TCEAL2Q9H3H9 227 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 WDR76Q9H967 626 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 STARD10Q9Y365 291 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 A0A1B0GVT2 93 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 CTAG2O75638 210 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 SEMA4FO95754 770 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 CCR5P51681 352 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 EFNB2P52799 333 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 RAB38P57729 211 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TRMT12Q53H54 448 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 C16orf54Q6UWD8 224 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TMPPEQ6ZT21 453 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 SFTPA2Q8IWL1 248 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 OR51B6Q9H340 312 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 PRO3102Q9H379 93 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 URGCP-MRPS24S4R325 110 aa12.03□□□□□ -0.48
SYNGAP1-204ENST00000449372 TMEM131Q92545 1883 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 GMFGO60234 142 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 METTL15P1P0C7V9 234 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 TRA2AQ13595 282 aaKnown RBP eCLIP12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 EBPQ15125 230 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 RPL7L1Q6DKI1 246 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 WBP2NLQ6ICG8 309 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 TMEM229BQ8NBD8 167 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 OR51L1Q8NGJ5 315 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 CST11Q9H112 138 aa12.02□□□□□ -0.48
SYNGAP1-204ENST00000449372 A6NNC1 897 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZNF727A8MUV8 499 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 H0YIZ8 118 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 GPANK1O95872 356 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 ADRA2CP18825 462 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 AKT2P31751 481 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 FXYD6P3P58550 94 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 SHISA5Q8N114 240 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 NMNAT3Q96T66 252 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 MAS1P04201 325 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 CXCL1P09341 107 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 ALG10Q5BKT4 473 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZNF343Q6P1L6 599 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 Q6ZS52 159 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 RNF44Q7L0R7 432 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 RD3Q7Z3Z2 195 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 ARHGEF39Q8N4T4 335 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR6N2Q8NGY6 317 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 FAM3CQ92520 227 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 GPX7Q96SL4 187 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 INTS14Q96SY0 518 aa12.02□□□□□ -0.49
SYNGAP1-204ENST00000449372 NPIPA5A0A0B4J1W7 369 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 NPIPA7E9PJI5 369 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 DVL1O14640 695 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 NUDT21O43809 227 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZIC2O95409 532 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 CELA2BP08218 269 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 NPIPA8P0DM63 369 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR13C7P0DN81 318 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 SNCAP37840 140 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 AFF3P51826 1226 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 TAS2R31P59538 309 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 ID2Q02363 134 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZNF584Q8IVC4 421 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 CPEB3Q8NE35 698 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 Q8WTZ3 238 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 PATE1Q8WXA2 126 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 SLC25A31Q9H0C2 315 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 VSIG4Q9Y279 399 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 CYB5BO43169 146 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZFPL1O95159 310 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 LYPD3O95274 346 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 IL18BPO95998 194 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 IFNA6P05013 189 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 RABIFP47224 123 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 DNASE1L1P49184 302 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 CTXN1P60606 82 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 ZNF141Q15928 474 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR52R1Q8NGF1 315 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR51D1Q8NGF3 324 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR10G6Q8NH81 332 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 CBLN4Q9NTU7 201 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 GTF2A1LQ9UNN4 478 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 DHDHQ9UQ10 334 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 SCN3AQ9NY46 2000 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 HLA-DQA2P01906 255 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 RUNX2Q13950 521 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 FZD2Q14332 565 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 MIDNQ504T8 468 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 KIAA0895LQ68EN5 471 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 OR13C8Q8NGS7 320 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 NEK7Q8TDX7 302 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 GPX8Q8TED1 209 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 CCDC74AQ96AQ1 378 aa12.01□□□□□ -0.49
SYNGAP1-204ENST00000449372 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms