RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 FAM227AF5H4B4 570 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LRP3O75074 770 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 GPR32O75388 356 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 OMGP23515 440 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 EPHA8P29322 1005 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 FASLGP48023 281 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LTBQ06643 244 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 EIF3IQ13347 325 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 PDZD11Q5EBL8 140 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PHYHD1Q5SRE7 291 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PRAMEF14Q5SWL7 426 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 CALHM1Q8IU99 346 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SYNPRQ8TBG9 265 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 KHSRPQ92945 711 aaKnown RBP eCLIP2.64□□□□□ -1.995e-7■■■■□ 21.7
CHD9-203ENST00000447540 MUCL1Q96DR8 90 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 NEURL3Q96EH8 262 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PEX11GQ96HA9 241 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SLC35G5Q96KT7 338 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 MRGPRX3Q96LB0 322 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 Q9N2J8 555 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 UBE2J1Q9Y385 318 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 TNRC6AQ8NDV7 1962 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 LTN1O94822 1766 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TRAV18A0A075B6X5 111 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 MSTNO14793 375 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 ARPC3O15145 178 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 KLF8O95600 359 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 CSTBP04080 98 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 OR5AL1P0C617 328 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 EFNA3P52797 238 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SSBP2P81877 361 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 MRPS34P82930 218 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 SMAD3P84022 425 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 DGCR2P98153 550 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 RBPJQ06330 500 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SNAI3Q3KNW1 292 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TXNRD3NBQ6F5E7 133 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LGI3Q8N145 548 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PNPLA1Q8N8W4 532 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 OR5H2Q8NGV7 314 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PCNPQ8WW12 178 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 GPATCH2LQ9NWQ4 482 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TNCP24821 2201 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 FNDC1Q4ZHG4 1894 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 FOXE1O00358 373 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 HSD17B6O14756 317 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 HCRTR1O43613 425 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 IL18BPO95998 194 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TOMM40O96008 361 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 DCTDP32321 178 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 EMP2P54851 167 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PCBP3P57721 371 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 TMPRSS3P57727 454 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 KRTDAPP60985 99 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PAX2Q02962 417 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 GPM6BQ13491 265 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LRRC37A5PQ49AS3 106 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 IGSF8Q969P0 613 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SEH1LQ96EE3 360 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SRA1Q9HD15 236 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 KLHL13Q9P2N7 655 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LAMP3Q9UQV4 416 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SF3B6Q9Y3B4 125 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 AGRNO00468 2067 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 DYSFO75923 2080 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 MDFIC2A0A1B0GVS7 189 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 C19orf67A6NJJ6 358 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 CD8B2A6NJW9 211 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PYCARD-AS1I3L0S3 204 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 MPPED1O15442 326 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 CLDN11O75508 207 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SCGB2A1O75556 95 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 IRF2P14316 349 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PGCP20142 388 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 CSNK2A1P68400 391 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 CCL7P80098 99 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SLC22A6Q4U2R8 563 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 VAX1Q5SQQ9 334 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TTLL10Q6ZVT0 673 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 ZNF550Q7Z398 422 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 ZNF440Q8IYI8 595 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 CSNK2A3Q8NEV1 391 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LRRC15Q8TF66 581 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TMEM40Q8WWA1 233 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 TMEM186Q96B77 213 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LRRC61Q9BV99 259 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SLC52A3Q9NQ40 469 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 MED29Q9NX70 200 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 BTG4Q9NY30 223 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 COLQQ9Y215 455 aaPredicted RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 PHF3Q92576 2039 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 FOCADQ5VW36 1801 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 LRATO95237 230 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 SERPINE2P07093 398 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 FTH1P19P0C7X4 201 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 RPS23P62266 143 aaKnown RBP2.64□□□□□ -1.99
CHD9-203ENST00000447540 SLBPQ14493 270 aaKnown RBP eCLIP2.64□□□□□ -1.99
CHD9-203ENST00000447540 FAM78BQ5VT40 261 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 PWWP2BQ6NUJ5 590 aa2.64□□□□□ -1.99
CHD9-203ENST00000447540 RTN4RL1Q86UN2 441 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms