RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 OR2G3Q8NGZ4 309 aa10.06□□□□□ -0.8
ZNF550-204ENST00000447310 SRPK3Q9UPE1 567 aa10.06□□□□□ -0.8
ZNF550-204ENST00000447310 UTRNP46939 3433 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 OR6C76A6NM76 312 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 SHISA8B8ZZ34 492 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 H0YIG0 161 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 MSTNO14793 375 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 ZNF217O75362 1048 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 TK1P04183 234 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 CRYBA1P05813 215 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 FGF2P09038 288 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 APOBEC1P41238 236 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 CSNK1EP49674 416 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 OR1D5P58170 312 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 ZNF121P58317 390 aaPredicted RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 SP6Q3SY56 376 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 RPUSD3Q6P087 351 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 MOB3CQ70IA8 216 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 LGI3Q8N145 548 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 SFT2D1Q8WV19 159 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 ZNRF4Q8WWF5 429 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 CDCA3Q99618 268 aaPredicted RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 NIPSNAP3BQ9BS92 247 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 HSPB6O14558 160 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 HPP00738 406 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 OR5H8P0DN80 308 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 NME1P15531 152 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 EN2P19622 333 aaPredicted RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 CAPZBP47756 277 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 LIMK1P53667 647 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 SLC25A42Q86VD7 318 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 STT3BQ8TCJ2 826 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 IL1F10Q8WWZ1 152 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 KCNMB2Q9Y691 235 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 MED19A0JLT2 244 aaPredicted RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 ZNF705GA8MUZ8 300 aaPredicted RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 PNLIPRP2P54317 469 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 HAGHQ16775 308 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 ADAD2Q8NCV1 583 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 OR14L1PQ8NHC6 308 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 PAPOLGQ9BWT3 736 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 GPR173Q9NS66 373 aa10.05□□□□□ -0.8
ZNF550-204ENST00000447310 MRPS18BQ9Y676 258 aaKnown RBP10.05□□□□□ -0.8
ZNF550-204ENST00000447310 MBTPS2O43462 519 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 SPP1P10451 314 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 ZNF266Q14584 549 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 HIST2H3PS2Q5TEC6 136 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 GJC3Q8NFK1 279 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 ELSPBP1Q96BH3 223 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 SHARPINQ9H0F6 387 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 GFOD1Q9NXC2 390 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 CA14Q9ULX7 337 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 VSIG4Q9Y279 399 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 SVILO95425 2214 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 OR2M5A3KFT3 312 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 PPP1R2P9O14990 202 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 TNFSF14O43557 240 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 COL9A1P20849 921 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 ABCD3P28288 659 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 RPS11P62280 158 aaKnown RBP eCLIP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 PLP2Q04941 152 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 MIDNQ504T8 468 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 C16orf47Q6ZP98 133 aaPredicted RBP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 SLC38A9Q8NBW4 561 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 CCDC54Q8NEL0 328 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 MITD1Q8WV92 249 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 SARGQ9BW04 601 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 LMAN1LQ9HAT1 526 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 TNS1Q9HBL0 1735 aaKnown RBP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 SFT2D2O95562 160 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 GUSBP08236 651 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 HIST1H1DP16402 221 aaKnown RBP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 HTR5AP47898 357 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 PIGPP57054 158 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 PRSS54Q6PEW0 395 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 FAM24BQ8N5W8 94 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 CPNE4Q96A23 557 aaPredicted RBP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 ISOC2Q96AB3 205 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 NECAP2Q9NVZ3 263 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 PILRAQ9UKJ1 303 aa10.04□□□□□ -0.8
ZNF550-204ENST00000447310 EP300Q09472 2414 aaPredicted RBP10.04□□□□□ -0.8
ZNF550-204ENST00000447310 TRBV5-5A0A0J9YX44 114 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 ABCD4O14678 606 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 FABP1P07148 127 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 GPR3P46089 330 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 RPL23AP62750 156 aaKnown RBP10.03□□□□□ -0.8
ZNF550-204ENST00000447310 GRB2P62993 217 aaKnown RBP10.03□□□□□ -0.8
ZNF550-204ENST00000447310 IKZF1Q13422 519 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 LINC01590Q5TEZ4 76 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 HIST2H3AQ71DI3 136 aa10.03□□□□□ -0.8
ZNF550-204ENST00000447310 ZNF321PQ8N8H1 164 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms