RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SUMF1Q8NBK3 374 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 SLAMF6Q96DU3 332 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 GPX7Q96SL4 187 aaPredicted RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 RPP25Q9BUL9 199 aaKnown RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 S1PR5Q9H228 398 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PDE7BQ9NP56 450 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 COL4A6Q14031 1691 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 WRBO00258 174 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 TXNDC12O95881 172 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 IFNA2P01563 188 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 IL11P20809 199 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 BCKDHBP21953 392 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 TMEM33P57088 247 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 ANKRD55Q3KP44 614 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 TMEM196Q5HYL7 178 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 TMEM182Q6ZP80 229 aaPredicted RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 CPEB2Q7Z5Q1 589 aaKnown RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 C15orf54Q8N8G6 183 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PBDC1Q9BVG4 233 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PBOV1Q9GZY1 135 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PLEKHJ1Q9NW61 149 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 B3GALT5Q9Y2C3 310 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 RHPN2P1A8MT19 583 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PLRG1O43660 514 aaKnown RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 NXPH3O95157 252 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 CD37P11049 281 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 RAB5AP20339 215 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 GPR3P46089 330 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 GSK3AP49840 483 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 RAB5CP51148 216 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 RHEBQ15382 184 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 C4orf17Q53FE4 359 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 ACER2Q5QJU3 275 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 HIST2H3AQ71DI3 136 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
COPB1-202ENST00000439561 PGAM5Q96HS1 289 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PLA2G2FQ9BZM2 168 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 NMES1Q9C002 83 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 TOLLIPQ9H0E2 274 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 PARPBPQ9NWS1 579 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 KCNIP3Q9Y2W7 256 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 RP1P56715 2156 aa8.07□□□□□ -1.12
COPB1-202ENST00000439561 IGHV3-20A0A0C4DH32 117 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 FAM221AA4D161 298 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 CSTBP04080 98 aaKnown RBP8.06□□□□□ -1.12
COPB1-202ENST00000439561 TMEM225BP0DP42 221 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 CDAP32320 146 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 OPRM1P35372 400 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 EIF2S3P41091 472 aaKnown RBP8.06□□□□□ -1.12
COPB1-202ENST00000439561 SGCBQ16585 318 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 HAGHQ16775 308 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 GAB4Q2WGN9 574 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 RPUSD3Q6P087 351 aaKnown RBP8.06□□□□□ -1.12
COPB1-202ENST00000439561 BATF2Q8N1L9 274 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 KCNG3Q8TAE7 436 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 PIGTQ969N2 578 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 BMFQ96LC9 184 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 ZNF2Q9BSG1 426 aaPredicted RBP8.06□□□□□ -1.12
COPB1-202ENST00000439561 C5orf66Q9H5L9 145 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 GPR84Q9NQS5 396 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 C1orf123Q9NWV4 160 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 ASH2LQ9UBL3 628 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 CABIN1Q9Y6J0 2220 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 LINC01553A4QN01 128 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 COLCA2A8K830 154 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 A8MVM7 634 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 C9JQL5 133 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 JTBO76095 146 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 SFTPDP35247 375 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 FOXL2P58012 376 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 UNC119Q13432 240 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 SPIN3Q5JUX0 258 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 OGFOD3Q6PK18 319 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 OR56B1Q8NGI3 324 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 SAT2Q96F10 170 aaPredicted RBP8.06□□□□□ -1.12
COPB1-202ENST00000439561 REEP6Q96HR9 211 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 TOX2Q96NM4 488 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 OR10A2Q9H208 303 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 RAB18Q9NP72 206 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 KLRF1Q9NZS2 232 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 SLC5A6Q9Y289 635 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 LRRK1Q38SD2 2015 aa8.06□□□□□ -1.12
COPB1-202ENST00000439561 STMND1H3BQB6 276 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 FGF16O43320 207 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 TNFSF14O43557 240 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 SCGNO76038 276 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CST4P01036 141 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 THEGLP0DJG4 465 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CD79AP11912 226 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 TUBG1P23258 451 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 CHATP28329 748 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 SULT1A1P50225 295 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 POLR2HP52434 150 aaKnown RBP8.05□□□□□ -1.12
COPB1-202ENST00000439561 SLC26A5P58743 744 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 UBE2KP61086 200 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 ASPHD2Q6ICH7 369 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 SSX9Q7RTT3 188 aa8.05□□□□□ -1.12
COPB1-202ENST00000439561 LRRC75AQ8NAA5 344 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms