RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 LAP3P28838 519 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 MAP1BP46821 2468 aaKnown RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 TAS2R31P59538 309 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 EIF5AP63241 154 aaKnown RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 RPL18Q07020 188 aaKnown RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 MFGE8Q08431 387 aaPredicted RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 HMGN3Q15651 99 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 AWAT1Q58HT5 328 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 EMC4Q5J8M3 183 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 CHST4Q8NCG5 386 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 MARCH1Q8TCQ1 289 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 S100PBPQ96BU1 408 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 LPAR4Q99677 370 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 TUBA4BQ9H853 241 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 TAF9BQ9HBM6 251 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 PDE7BQ9NP56 450 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 LRIT1Q9P2V4 623 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 TBC1D29Q9UFV1 150 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 GDF2Q9UK05 429 aaPredicted RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 MEGF11A6BM72 1044 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SERINC4A6NH21 518 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 PPIHO43447 177 aaKnown RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 HLA-DQA2P01906 255 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SULT1A2P50226 295 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 SSTP61278 116 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 C9orf152Q5JTZ5 239 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 TEX30Q5JUR7 227 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 RPL7L1Q6DKI1 246 aaKnown RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 ZNF679Q8IYX0 411 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 LIPHQ8WWY8 451 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 PTX4Q96A99 478 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 ANKRD9Q96BM1 317 aaPredicted RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 FOXN4Q96NZ1 517 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 PFDN5Q99471 154 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 WDR77Q9BQA1 342 aaPredicted RBP7.62□□□□□ -1.19
HPS4-206ENST00000439453 MMP25Q9NPA2 562 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 NBEAQ8NFP9 2946 aa7.62□□□□□ -1.19
HPS4-206ENST00000439453 RAB27BO00194 218 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 OR10H2O60403 315 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 CSTBP04080 98 aaKnown RBP7.61□□□□□ -1.19
HPS4-206ENST00000439453 IFI6P09912 130 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 RAB6AP20340 208 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 DNASE1L1P49184 302 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 BLKP51451 505 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 CDCP2Q5VXM1 449 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ZNF761Q86XN6 746 aaPredicted RBP7.61□□□□□ -1.19
HPS4-206ENST00000439453 GGACTQ9BVM4 153 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 PARP11Q9NR21 331 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 HEBP2Q9Y5Z4 205 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 FAM221BA6H8Z2 402 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 FOXS1O43638 330 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ADAP1O75689 374 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 PMP2P02689 132 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ASAH2BP0C7U1 165 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 DAOP14920 347 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 S1PR1P21453 382 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ADH6P28332 368 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 RAB2AP61019 212 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 EBPQ15125 230 aaKnown RBP7.61□□□□□ -1.19
HPS4-206ENST00000439453 C1orf100Q5SVJ3 147 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 HOGA1Q86XE5 327 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 OR4D6Q8NGJ1 314 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 OR4C3Q8NH37 302 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ASB17Q8WXJ9 295 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 IP6K3Q96PC2 410 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 RAB18Q9NP72 206 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 RAB22AQ9UL26 194 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 OR8U9P0C7N5 309 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ITGA3P26006 1051 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 HTR5AP47898 357 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 GSK3AP49840 483 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 INSM1Q01101 510 aaPredicted RBP7.61□□□□□ -1.19
HPS4-206ENST00000439453 SLC9A3R2Q15599 337 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 NNATQ16517 81 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.61□□□□□ -1.19
HPS4-206ENST00000439453 SLC18B1Q6NT16 456 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ADAM5Q6NVV9 412 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 NPSR1Q6W5P4 371 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 Q6ZRG5 221 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 ATG4DQ86TL0 474 aaPredicted RBP7.61□□□□□ -1.19
HPS4-206ENST00000439453 CATSPERDQ86XM0 798 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 CSNK1A1LQ8N752 337 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 OR8U1Q8NH10 309 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 OR51F2Q8NH61 342 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 FAM46BQ96A09 425 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 DUSP23Q9BVJ7 150 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 SRMSQ9H3Y6 488 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 RGCCQ9H4X1 137 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 DNAJB11Q9UBS4 358 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 B9D1Q9UPM9 204 aa7.61□□□□□ -1.19
HPS4-206ENST00000439453 A0A1W2PNU3 283 aaPredicted RBP7.6□□□□□ -1.19
HPS4-206ENST00000439453 M0R036 132 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 SPARCP09486 303 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 SLC35E2P0CK97 266 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 PNMTP11086 282 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 OR2B8PP59922 312 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 TMEM128Q5BJH2 165 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 NCMAPQ5T1S8 102 aa7.6□□□□□ -1.19
HPS4-206ENST00000439453 WBP2NLQ6ICG8 309 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms