RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 HOGA1Q86XE5 327 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 FAM71E2Q8N5Q1 922 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 C8orf44Q96CB5 159 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 RAB3CQ96E17 227 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 IER2Q9BTL4 223 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 GPR61Q9BZJ8 451 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 KAT7O95251 611 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 CAMLGP49069 296 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 CX3CR1P49238 355 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 NAAAQ02083 359 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 C1orf61Q13536 156 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 GAMTQ14353 236 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 CNKSR3Q6P9H4 555 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 RSC1A1Q92681 617 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 DGAT2Q96PD7 388 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 RTBDNQ9BSG5 229 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 G6PC3Q9BUM1 346 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 NXF5Q9H1B4 397 aaKnown RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SLCO5A1Q9H2Y9 848 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 MYOZ1Q9NP98 299 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 WRBO00258 174 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 OR2C1O95371 312 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 NSA2O95478 260 aaKnown RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF708P17019 499 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 AMY2BP19961 511 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 HTR5AP47898 357 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 PRSS12P56730 875 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SCAND1P57086 179 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SURF2Q15527 256 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 OR9K2Q8NGE7 335 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 OR13G1Q8NGZ3 307 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ABHD14AQ9BUJ0 271 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 EGLN1Q9GZT9 426 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 TMPRSS5Q9H3S3 457 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 LYRM4Q9HD34 91 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF701Q9NV72 531 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 EHFQ9NZC4 300 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SCDO00767 359 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 SFT2D2O95562 160 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 QDPRP09417 244 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 OR3A2P47893 321 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF84P51523 738 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 KCTD18Q6PI47 426 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 DOK5Q9P104 306 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 KPTNQ9Y664 436 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 TRBV6-7A0A0A0MS04 114 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 CDRT15L2A8MXV6 281 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 GABRA4P48169 554 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 SULT1A2P50226 295 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 C14orf28Q4W4Y0 310 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 ARRDC1Q8N5I2 433 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 OR52N5Q8NH56 324 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 OR51E1Q8TCB6 317 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 MR1Q95460 341 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 FAM71F1Q96KD3 344 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 UNKLQ9H9P5 680 aaKnown RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 ELL3Q9HB65 397 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-204ENST00000438964 G6PC2Q9NQR9 355 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 ZDHHC8Q9ULC8 765 aa11.88□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF264O43296 627 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 SYT7O43581 403 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 S100A2P29034 98 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 RPS23P62266 143 aaKnown RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 CSNK2A1P68400 391 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 ACY1Q03154 408 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF117Q03924 483 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 TLE1Q04724 770 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 C16orf47Q6ZP98 133 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 P4HA3Q7Z4N8 544 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 CSNK2A3Q8NEV1 391 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 MFSD8Q8NHS3 518 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 MRPL24Q96A35 216 aaKnown RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 RAB7BQ96AH8 199 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 GPER1Q99527 375 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 HDHD3Q9BSH5 251 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 LMF2Q9BU23 707 aaKnown RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 GPR132Q9UNW8 380 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 RHPN2P1A8MT19 583 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 SHISA8B8ZZ34 492 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 UTS2O95399 124 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 CTNNB1P35222 781 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 CCL20P78556 96 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 CYCSP99999 105 aaKnown RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 GPM6BQ13491 265 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 PNLIPRP3Q17RR3 467 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms