RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	MICB	Q29980	383 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ACTBL2	Q562R1	376 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PRAMEF20	Q5VT98	475 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	COMMD2	Q86X83	199 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FAM89B	Q8N5H3	189 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OCSTAMP	Q9BR26	566 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PDCD10	Q9BUL8	212 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZNF416	Q9BWM5	594 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM59	Q9BXS4	323 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	USP34	Q70CQ2	3546 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	LOC100509620	A0A075B734	347 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	IGHV1-45	A0A0A0MS14	117 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145		D6RAR5	112 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PMP2	P02689	132 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	IFNA6	P05013	189 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TAS2R31	P59538	309 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HIST1H3A	P68431	136 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	IL11RA	Q14626	422 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HLA-B	Q31612	363 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HIST2H3PS2	Q5TEC6	136 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ACOT7L	Q6ZUV0	252 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HIST2H3A	Q71DI3	136 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ARRDC1	Q8N5I2	433 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZNF283	Q8N7M2	679 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HLA-C	Q95604	372 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SEC22A	Q96IW7	307 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ANGPTL4	Q9BY76	406 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZNF700	Q9H0M5	742 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PRO3102	Q9H379	93 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GAREM1	Q9H706	876 aa		14.16	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	C5orf63	A6NC05	138 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FOXI3	A8MTJ6	420 aa	Predicted RBP	14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	RAD51D	O75771	328 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	UMOD	P07911	640 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CELA2A	P08217	269 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	MSR1	P21757	451 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	AVPR2	P30518	371 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HOXA6	P31267	233 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ENDOG	Q14249	297 aa	Known RBP	14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OPN5	Q6U736	354 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	MOB3C	Q70IA8	216 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OR56B1	Q8NGI3	324 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TERB2	Q8NHR7	220 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PHYHIPL	Q96FC7	376 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	LYZL4	Q96KX0	146 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	VRK1	Q99986	396 aa	Predicted RBP	14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	DNTTIP1	Q9H147	329 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PROK2	Q9HC23	129 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SH2D2A	Q9NP31	389 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FSCN3	Q9NQT6	498 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PILRB	Q9UKJ0	227 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145		A0A0U1RQV5	110 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	KANTR	A0A1W2PQU2	76 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SMAD9	O15198	467 aa	Known RBP	14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HCK	P08631	526 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CD63	P08962	238 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ECH1	Q13011	328 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PHYHD1	Q5SRE7	291 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PMS2CL	Q68D20	193 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM185A	Q8NFB2	350 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	MARCH1	Q8TCQ1	289 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NABP1	Q96AH0	204 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM41A	Q96HV5	264 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZC3H10	Q96K80	434 aa	Known RBP	14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NELFA	Q9H3P2	528 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	BANF2	Q9H503	90 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	BARX1	Q9HBU1	254 aa	Predicted RBP	14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GHRL	Q9UBU3	117 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GPR132	Q9UNW8	380 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SIT1	Q9Y3P8	196 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145		V9GYS6	101 aa		14.15	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TNRC6B	Q9UPQ9	1833 aa	Known RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	TRBV6-7	A0A0A0MS04	114 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	CCDC163	A0A0D9SF12	145 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145		A0A1W2PP11	408 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	BET1	O15155	118 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	NAT2	P11245	290 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	LIF	P15018	202 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	OTX1	P32242	354 aa	Predicted RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	THBS4	P35443	961 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	DLST	P36957	453 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	CSNK1A1	P48729	337 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	EXT1	Q16394	746 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	TMEM123	Q8N131	208 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	PXT1	Q8NFP0	134 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	URM1	Q9BTM9	101 aa	Known RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	GPR160	Q9UJ42	338 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	ZIC3	O60481	467 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	COX6A1	P12074	109 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	VAMP1	P23763	118 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	HOXD11	P31277	338 aa	Predicted RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	CBX5	P45973	191 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	SUCLG1	P53597	346 aa	Known RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	TAGLN	Q01995	201 aa	Known RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	SGCA	Q16586	387 aa		14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	RSPO1	Q2MKA7	263 aa	Predicted RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	PEG10	Q86TG7	708 aa	Known RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	RELL2	Q8NC24	303 aa	Predicted RBP	14.14	□□□□□ -0.15
HLA-DQB2-231	ENST00000435145	GJC3	Q8NFK1	279 aa		14.14	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms