RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 ZNF275Q9NSD4 429 aaPredicted RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 CKLFQ9UBR5 152 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 NDRG3Q9UGV2 375 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 FOXJ3Q9UPW0 622 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 SPEF1Q9Y4P9 236 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 N6AMT1Q9Y5N5 214 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 ZNF469Q96JG9 3925 aaPredicted RBP7.15□□□□□ -1.27
SMARCAL1-206ENST00000427645 PCNX1Q96RV3 2341 aa7.15□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZNF503-AS2A6NEH8 195 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 P2RY10O00398 339 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 CASKO14936 926 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 ICMTO60725 284 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 CDRT1O95170 752 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 IGLV1-44P01699 117 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 IGLV3-1P01715 115 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 SLC2A1P11166 492 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 IGFBP2P18065 325 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 CCL1P22362 96 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 CALRP27797 417 aaKnown RBP7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 PEX19P40855 299 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 MTORP42345 2549 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 MAP2K3P46734 347 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 SERPINB10P48595 397 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 IDH3GP51553 393 aaPredicted RBP7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 NCS1P62166 190 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 TSC22D1Q15714 1073 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 ODF4Q2M2E3 257 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 PGAP1Q75T13 922 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 COMMD2Q86X83 199 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 DMRTC2Q8IXT2 367 aaPredicted RBP7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 PARP16Q8N5Y8 322 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 OR8B12Q8NGG6 310 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 OR5D14Q8NGL3 314 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 OR13C3Q8NGS6 347 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 OR51E1Q8TCB6 317 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 TMEM106AQ96A25 262 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 SPSB4Q96A44 273 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 DERL3Q96Q80 235 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 OR14A2Q96R54 314 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 KCNS3Q9BQ31 491 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 BCL2L14Q9BZR8 327 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 GSX1Q9H4S2 264 aaPredicted RBP7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 NEK6Q9HC98 313 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 NOX4Q9NPH5 578 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 GPR84Q9NQS5 396 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 SNTG1Q9NSN8 517 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 PTTG2Q9NZH5 202 aa7.14□□□□□ -1.27
SMARCAL1-206ENST00000427645 ITPR3Q14573 2671 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 TRBV5-7A0A0A0MS05 114 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 A0A1B0GTI1 187 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 LOC107986453A0A1B0GWG9 222 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 A0A1W2PPW3 197 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 A0A1W2PR80 420 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 DHRS3O75911 302 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 ALX3O95076 343 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 CRYAAP02489 173 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 EPXP11678 715 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZNF35P13682 527 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 CD99P14209 185 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZNF182P17025 639 aaPredicted RBP7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 HOXB4P17483 251 aaPredicted RBP7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 PTAFRP25105 342 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 SDC2P34741 201 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 GNALP38405 381 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 RPS19P39019 145 aaKnown RBP7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 DDOSTP39656 456 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 SOX2P48431 317 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 UCP2P55851 309 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 SORDQ00796 357 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 RIPPLY1Q0D2K3 151 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 SPCS2Q15005 226 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 TAB1Q15750 504 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 SNAI3Q3KNW1 292 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZBTB37Q5TC79 503 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 LIAT1Q6ZQX7 453 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 LINC00299Q6ZSB3 139 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 FTMTQ8N4E7 242 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 SEMA6DQ8NFY4 1073 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 OR14K1Q8NGZ2 314 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 DYNC2LI1Q8TCX1 351 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 FGGYQ96C11 551 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 FOXRED1Q96CU9 486 aaPredicted RBP7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 TRMT61AQ96FX7 289 aaKnown RBP7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 REEP6Q96HR9 211 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZCCHC4Q9H5U6 513 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 PLEKHA1Q9HB21 404 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 NOX3Q9HBY0 568 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZNF319Q9P2F9 582 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 A3GALT2U3KPV4 340 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 V9GYS6 101 aa7.13□□□□□ -1.27
SMARCAL1-206ENST00000427645 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 IGHV1-18A0A0C4DH31 117 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 A0A1W2PPK0 400 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 VSTM5A8MXK1 200 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 MAGEB3O15480 346 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 ERCC1P07992 297 aaPredicted RBP7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 CCL2P13500 99 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 SELEP16581 610 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 ZNF20P17024 532 aa7.12□□□□□ -1.27
SMARCAL1-206ENST00000427645 RAB3BP20337 219 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms