RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 DOC2BQ14184 412 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 OR8B8Q15620 311 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 YIF1BQ5BJH7 314 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 AGAP6Q5VW22 663 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 LIPKQ5VXJ0 399 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 FTMTQ8N4E7 242 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 ZFP41Q8N8Y5 198 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.3
COL11A1-204ENST00000427239 PGLYRP3Q96LB9 341 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 MRPL37Q9BZE1 423 aaKnown RBP13.21□□□□□ -0.3
COL11A1-204ENST00000427239 PLEKHF2Q9H8W4 249 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 CGGBP1Q9UFW8 167 aaPredicted RBP13.21□□□□□ -0.3
COL11A1-204ENST00000427239 PURGQ9UJV8 347 aaKnown RBP13.21□□□□□ -0.3
COL11A1-204ENST00000427239 FZR1Q9UM11 496 aa13.21□□□□□ -0.3
COL11A1-204ENST00000427239 LOC107986453A0A1B0GWG9 222 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 CD300LBA8K4G0 201 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 IQCF6A8MYZ5 107 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 INMTO95050 263 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 PSMB9P28065 219 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 RIPPLY1Q0D2K3 151 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 MSMPQ1L6U9 139 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 LRP11Q86VZ4 500 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 CSNK2A3Q8NEV1 391 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 SEMA6DQ8NFY4 1073 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 GPR148Q8TDV2 347 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 C10orf35Q96D05 121 aa13.2□□□□□ -0.3
COL11A1-204ENST00000427239 FAM71F1Q96KD3 344 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-204ENST00000427239 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-204ENST00000427239 DANCRP0C864 163 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 SMIM18P0DKX4 95 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 BMP4P12644 408 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 TRAM1Q15629 374 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 ZBTB37Q5TC79 503 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 PHC2Q8IXK0 858 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 MUL1Q969V5 352 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 SYT3Q9BQG1 590 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 UBTD1Q9HAC8 227 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 V9GYS6 101 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 CCRL2O00421 344 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
COL11A1-204ENST00000427239 TSTQ16762 297 aaKnown RBP13.19□□□□□ -0.3
COL11A1-204ENST00000427239 SWI5Q1ZZU3 235 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 MST1LQ2TV78 715 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 KRT74Q7RTS7 529 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 THRSPQ92748 146 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 SOX7Q9BT81 388 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 SLC22A4Q9H015 551 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 ZNF275Q9NSD4 429 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-204ENST00000427239 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
COL11A1-204ENST00000427239 TAAR3PQ9P1P4 343 aa13.19□□□□□ -0.3
COL11A1-204ENST00000427239 HECTD1Q9ULT8 2610 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 FBN2P35556 2912 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 SERPINA3P01011 423 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 ACKR3P25106 362 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 MMP15P51511 669 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 TNK1Q13470 666 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 NKPD1Q17RQ9 610 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 ZNF787Q6DD87 383 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 DTX2Q86UW9 622 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 MS4A5Q9H3V2 200 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 PIGLQ9Y2B2 252 aa13.18□□□□□ -0.3
COL11A1-204ENST00000427239 ANKRD30BLA7E2S9 258 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 CD2P06729 351 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 OCM2P0CE71 109 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 GABRA5P31644 462 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 GP2P55259 537 aaKnown RBP13.17□□□□□ -0.3
COL11A1-204ENST00000427239 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL11A1-204ENST00000427239 SNRPD2P62316 118 aaKnown RBP13.17□□□□□ -0.3
COL11A1-204ENST00000427239 ALKBH6Q3KRA9 238 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 Q499Y3 187 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 BHLHE23Q8NDY6 225 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 OR13C3Q8NGS6 347 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 OR13G1Q8NGZ3 307 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 TMEM100Q9NV29 134 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 NDUFB11Q9NX14 153 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 MYEF2Q9P2K5 600 aaKnown RBP13.17□□□□□ -0.3
COL11A1-204ENST00000427239 ENPP5Q9UJA9 477 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 EDARQ9UNE0 448 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 NOP16Q9Y3C1 178 aaKnown RBP13.17□□□□□ -0.3
COL11A1-204ENST00000427239 PMF1-BGLAPU3KQ54 211 aa13.17□□□□□ -0.3
COL11A1-204ENST00000427239 ZNF816-ZNF321PA0A0X1KG74 233 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 M0R233 179 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 GMDSO60547 372 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 CST4P01036 141 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 CD8AP01732 235 aa13.16□□□□□ -0.3
COL11A1-204ENST00000427239 HLA-DPB1P04440 258 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms