RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 B3GALT1Q9Y5Z6 326 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 DENND4AQ7Z401 1863 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 PRAMEF27A3QJZ7 478 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 FITM1A5D6W6 292 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 SERINC4A6NH21 518 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 H7C417 338 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 ZFAND5O76080 213 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 ZNF85Q03923 595 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 DMKNQ6E0U4 476 aaPredicted RBP14.29□□□□□ -0.12
PKP4-205ENST00000426248 OR2T2Q6IF00 324 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 RPL22L1Q6P5R6 122 aaKnown RBP14.29□□□□□ -0.12
PKP4-205ENST00000426248 SLC36A1Q7Z2H8 476 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 MARCH3Q86UD3 253 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 ZNF248Q8NDW4 579 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 MIB2Q96AX9 1013 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 PIK3IP1Q96FE7 263 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 SRA1Q9HD15 236 aaKnown RBP14.29□□□□□ -0.12
PKP4-205ENST00000426248 SIRT7Q9NRC8 400 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 INPP5EQ9NRR6 644 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 DOK5Q9P104 306 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 ZMIZ1Q9ULJ6 1067 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 LOC390937A0A1W2PQ73 354 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 HTR5AP47898 357 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 CAV2P51636 162 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 LRP11Q86VZ4 500 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 LPAR3Q9UBY5 353 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 ZNF281Q9Y2X9 895 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 COL6A3P12111 3177 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 RNF222A6NCQ9 220 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 COX5BP10606 129 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 OR4S1Q8NGB4 309 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 CENPVL1A0A0U1RR11 272 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 GLSO94925 669 aaPredicted RBP14.28□□□□□ -0.12
PKP4-205ENST00000426248 EMDP50402 254 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 RELQ04864 619 aaPredicted RBP14.28□□□□□ -0.12
PKP4-205ENST00000426248 OR5AK2Q8NH90 309 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 NPRL2Q8WTW4 380 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 ZNF764Q96H86 408 aaPredicted RBP14.28□□□□□ -0.12
PKP4-205ENST00000426248 COMMD4Q9H0A8 199 aa14.28□□□□□ -0.12
PKP4-205ENST00000426248 A0A1B0GWA3 101 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 STK17BO94768 372 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 SCAF4O95104 1147 aaKnown RBP14.27□□□□□ -0.12
PKP4-205ENST00000426248 PLGP00747 810 aaPredicted RBP14.27□□□□□ -0.12
PKP4-205ENST00000426248 FRKP42685 505 aaPredicted RBP14.27□□□□□ -0.12
PKP4-205ENST00000426248 PSG6Q00889 435 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 MAMDC2Q7Z304 686 aaPredicted RBP14.27□□□□□ -0.12
PKP4-205ENST00000426248 AKIRIN1Q9H9L7 192 aaPredicted RBP14.27□□□□□ -0.12
PKP4-205ENST00000426248 SLC35A3Q9Y2D2 325 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 NUDT19A8MXV4 375 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 TEX30Q5JUR7 227 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 TIPARPQ7Z3E1 657 aaKnown RBP14.27□□□□□ -0.12
PKP4-205ENST00000426248 PLEKHA1Q9HB21 404 aa14.27□□□□□ -0.12
PKP4-205ENST00000426248 NPIPB9F8W1W9 429 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 ADAM10O14672 748 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 TRAPPC6AO75865 159 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 RPS18P62269 152 aaKnown RBP14.27□□□□□ -0.13
PKP4-205ENST00000426248 IL10RAQ13651 578 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 GXYLT1Q4G148 440 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.27□□□□□ -0.13
PKP4-205ENST00000426248 CARFQ8N187 725 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 TEX19Q8NA77 164 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 TMEM106AQ96A25 262 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 BPIFA2Q96DR5 249 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 CDC6Q99741 560 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 ZNF700Q9H0M5 742 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 PCNX2A6NKB5 2137 aa14.27□□□□□ -0.13
PKP4-205ENST00000426248 CYB5BO43169 146 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 ZNF264O43296 627 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 EIF4E2O60573 245 aaKnown RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 HEXAP06865 529 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 RCC1P18754 421 aaPredicted RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 TUBG1P23258 451 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 PPICP45877 212 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 GNG10P50151 68 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 STAC2Q6ZMT1 411 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 PXKQ7Z7A4 578 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 SLC38A9Q8NBW4 561 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 PARPBPQ9NWS1 579 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 CACNA1BQ00975 2339 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 H3BML4 177 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 DUSP8Q13202 625 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 PPP1R1AQ13522 171 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 CPEB2Q7Z5Q1 589 aaKnown RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 ZNF679Q8IYX0 411 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 ZNF610Q8N9Z0 462 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 TMEM104Q8NE00 496 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 SOX7Q9BT81 388 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 KCNG2Q9UJ96 466 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 TOX3O15405 576 aaPredicted RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 CDX1P47902 265 aaPredicted RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 ZNF239Q16600 458 aaKnown RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 MAML2Q8IZL2 1156 aaPredicted RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 HPSE2Q8WWQ2 592 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 GPER1Q99527 375 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 NELFAQ9H3P2 528 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 ADGRL4Q9HBW9 690 aa14.26□□□□□ -0.13
PKP4-205ENST00000426248 MRPL22Q9NWU5 206 aaKnown RBP14.26□□□□□ -0.13
PKP4-205ENST00000426248 STEAP1Q9UHE8 339 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms