RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 DGUOKQ16854 277 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 DPY19L1Q2PZI1 675 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CCDC153Q494R4 210 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CXorf66Q5JRM2 361 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-203ENST00000424270 OTPQ5XKR4 325 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 GPR139Q6DWJ6 353 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 ACP7Q6ZNF0 438 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 CNPY4Q8N129 248 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 COMMD1Q8N668 190 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 OR6Q1Q8NGQ2 317 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 C12orf43Q96C57 262 aaKnown RBP4.98□□□□□ -1.61
SDCBP-203ENST00000424270 NOL4LQ96MY1 436 aaPredicted RBP4.98□□□□□ -1.61
SDCBP-203ENST00000424270 OR52E6Q96RD3 313 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 ZBTB18Q99592 522 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 WACQ9BTA9 647 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 ALG12Q9BV10 488 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 TMED9Q9BVK6 235 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 C1orf21Q9H246 121 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 GHITMQ9H3K2 345 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 DCLRE1BQ9H816 532 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 LIN7BQ9HAP6 207 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 HAO2Q9NYQ3 351 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 USE1Q9NZ43 259 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 BTNL2Q9UIR0 455 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 LINC00527Q9UJ94 153 aa4.98□□□□□ -1.61
SDCBP-203ENST00000424270 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 PRORSD1PA6NEY8 169 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 ANKRD30BLA7E2S9 258 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 CD300LBA8K4G0 201 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 H7C1C5 153 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 M0QZK8 103 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 AP4M1O00189 453 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 RER1O15258 196 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 CHP2O43745 196 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 PSPNO60542 156 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 FUT1P19526 365 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 CCT5P48643 541 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 TGM4P49221 684 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 MTNR1BP49286 362 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 DYNLT3P51808 116 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 ZNF133P52736 654 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-203ENST00000424270 SLC25A1P53007 311 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 MVDP53602 400 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 LCN6P62502 163 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 RPL31P62899 125 aaKnown RBP4.97□□□□□ -1.61
SDCBP-203ENST00000424270 RBMY1FQ15415 496 aaKnown RBP4.97□□□□□ -1.61
SDCBP-203ENST00000424270 MAPK11Q15759 364 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 HAGHQ16775 308 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 ZDHHC24Q6UX98 284 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 TIFABQ6ZNK6 161 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 TMPRSS11FQ6ZWK6 438 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 CREG2Q8IUH2 290 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 FOXRED2Q8IWF2 684 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 OR4M1Q8NGD0 313 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 MOSPD2Q8NHP6 518 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 ACMSDQ8TDX5 336 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 MAL2Q969L2 176 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 GAFA1Q96PS6 74 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 SEPHS2Q99611 448 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 MCHR1Q99705 422 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 HIPK2Q9H2X6 1198 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 TXNIPQ9H3M7 391 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 RAD21L1Q9H4I0 556 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 RNPEPL1Q9HAU8 725 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 C19orf12Q9NSK7 152 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 RPS6KA6Q9UK32 745 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 EMCNQ9ULC0 261 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 SLC7A7Q9UM01 511 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 KLK5Q9Y337 293 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-203ENST00000424270 N6AMT1Q9Y5N5 214 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 SAR1BQ9Y6B6 198 aa4.97□□□□□ -1.61
SDCBP-203ENST00000424270 A6NIZ1 184 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 FAM90A8PA6NJQ4 464 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 A6NJY4 79 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 XKRYO14609 159 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 CDIPTO14735 213 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 POLR3GO15318 223 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-203ENST00000424270 TRIM13O60858 407 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.62
SDCBP-203ENST00000424270 SCG5P05408 212 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 FGF4P08620 206 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 OR8U8P0C7N1 319 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 ASAH2BP0C7U1 165 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 PIPP12273 146 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-203ENST00000424270 CCL3L1P16619 93 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 ENTPD1P49961 510 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 CAV3P56539 151 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 RAP1BP61224 184 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 RPL27P61353 136 aaKnown RBP4.96□□□□□ -1.62
SDCBP-203ENST00000424270 RAP1AP62834 184 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 CSNK2BP67870 215 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 KIR2DS1Q14954 304 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 ALG10Q5BKT4 473 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 C6orf10Q5SRN2 563 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 STUMQ69YW2 141 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 TEX38Q6PEX7 206 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF613Q6PF04 617 aa4.96□□□□□ -1.62
SDCBP-203ENST00000424270 KCTD8Q6ZWB6 473 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms