RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 UBE2NLQ5JXB2 153 aa8.81□□□□□ -1
USP54-205ENST00000424265 SAMD13Q5VXD3 122 aa8.81□□□□□ -1
USP54-205ENST00000424265 BCL2L2Q92843 193 aaPredicted RBP8.81□□□□□ -1
USP54-205ENST00000424265 EGLN1Q9GZT9 426 aa8.81□□□□□ -1
USP54-205ENST00000424265 PATE3B3GLJ2 98 aa8.8□□□□□ -1
USP54-205ENST00000424265 OR10J1P30954 320 aa8.8□□□□□ -1
USP54-205ENST00000424265 SSR4P51571 173 aa8.8□□□□□ -1
USP54-205ENST00000424265 WNT3P56703 355 aa8.8□□□□□ -1
USP54-205ENST00000424265 TAS2R19P59542 299 aa8.8□□□□□ -1
USP54-205ENST00000424265 COX15Q7KZN9 410 aa8.8□□□□□ -1
USP54-205ENST00000424265 CPEB2Q7Z5Q1 589 aaKnown RBP8.8□□□□□ -1
USP54-205ENST00000424265 LRP11Q86VZ4 500 aa8.8□□□□□ -1
USP54-205ENST00000424265 RCBTB1Q8NDN9 531 aa8.8□□□□□ -1
USP54-205ENST00000424265 OR1L3Q8NH93 324 aa8.8□□□□□ -1
USP54-205ENST00000424265 SLC7A13Q8TCU3 470 aa8.8□□□□□ -1
USP54-205ENST00000424265 GALNT14Q96FL9 552 aa8.8□□□□□ -1
USP54-205ENST00000424265 ZNF582Q96NG8 517 aaPredicted RBP8.8□□□□□ -1
USP54-205ENST00000424265 GPR27Q9NS67 375 aa8.8□□□□□ -1
USP54-205ENST00000424265 SEMA5BQ9P283 1151 aa8.8□□□□□ -1
USP54-205ENST00000424265 ENPP4Q9Y6X5 453 aa8.8□□□□□ -1
USP54-205ENST00000424265 TICRRQ7Z2Z1 1910 aa8.8□□□□□ -1
USP54-205ENST00000424265 EML2O95834 649 aa8.8□□□□□ -1
USP54-205ENST00000424265 ATP1B1P05026 303 aa8.8□□□□□ -1
USP54-205ENST00000424265 ZGLP1P0C6A0 271 aa8.8□□□□□ -1
USP54-205ENST00000424265 SELENOTP62341 195 aa8.8□□□□□ -1
USP54-205ENST00000424265 SQSTM1Q13501 440 aa8.8□□□□□ -1
USP54-205ENST00000424265 CEBPEQ15744 281 aa8.8□□□□□ -1
USP54-205ENST00000424265 ZNF791Q3KP31 576 aaPredicted RBP8.8□□□□□ -1
USP54-205ENST00000424265 SEC22AQ96IW7 307 aa8.8□□□□□ -1
USP54-205ENST00000424265 ADGRG7Q96K78 797 aa8.8□□□□□ -1
USP54-205ENST00000424265 LMF2Q9BU23 707 aaKnown RBP8.8□□□□□ -1
USP54-205ENST00000424265 RHCGQ9UBD6 479 aa8.8□□□□□ -1
USP54-205ENST00000424265 TESQ9UGI8 421 aaKnown RBP8.8□□□□□ -1
USP54-205ENST00000424265 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
USP54-205ENST00000424265 FKBP2P26885 142 aaKnown RBP8.8□□□□□ -1
USP54-205ENST00000424265 CCKARP32238 428 aa8.8□□□□□ -1
USP54-205ENST00000424265 SLC36A2Q495M3 483 aa8.8□□□□□ -1
USP54-205ENST00000424265 C10orf91Q5T1B1 145 aa8.8□□□□□ -1
USP54-205ENST00000424265 FAM69BQ5VUD6 431 aa8.8□□□□□ -1
USP54-205ENST00000424265 DNM1P34Q6PK57 102 aa8.8□□□□□ -1
USP54-205ENST00000424265 OVCH1Q7RTY7 1134 aa8.8□□□□□ -1
USP54-205ENST00000424265 WDR54Q9H977 334 aa8.8□□□□□ -1
USP54-205ENST00000424265 NMNAT1Q9HAN9 279 aaPredicted RBP8.8□□□□□ -1
USP54-205ENST00000424265 RXFP3Q9NSD7 469 aa8.8□□□□□ -1
USP54-205ENST00000424265 LYRM2Q9NU23 88 aaPredicted RBP8.8□□□□□ -1
USP54-205ENST00000424265 EXOGQ9Y2C4 368 aaKnown RBP8.8□□□□□ -1
USP54-205ENST00000424265 POLR1DQ9Y2S0 133 aa8.8□□□□□ -1
USP54-205ENST00000424265 BRWD1Q9NSI6 2320 aa8.8□□□□□ -1
USP54-205ENST00000424265 IGHV5-10-1A0A0J9YXX1 117 aa8.8□□□□□ -1
USP54-205ENST00000424265 AHRRA9YTQ3 701 aa8.8□□□□□ -1
USP54-205ENST00000424265 OGG1O15527 345 aa8.8□□□□□ -1
USP54-205ENST00000424265 CDC14BO60729 498 aa8.8□□□□□ -1
USP54-205ENST00000424265 PPICP45877 212 aa8.8□□□□□ -1
USP54-205ENST00000424265 MTNR1AP48039 350 aa8.8□□□□□ -1
USP54-205ENST00000424265 RUNX2Q13950 521 aa8.8□□□□□ -1
USP54-205ENST00000424265 CBFBQ13951 182 aa8.8□□□□□ -1
USP54-205ENST00000424265 KIAA0040Q15053 153 aa8.8□□□□□ -1
USP54-205ENST00000424265 TMEM183BQ1AE95 376 aa8.8□□□□□ -1
USP54-205ENST00000424265 HES3Q5TGS1 186 aa8.8□□□□□ -1
USP54-205ENST00000424265 FBXW9Q5XUX1 488 aa8.8□□□□□ -1
USP54-205ENST00000424265 SMIM4Q8WVI0 70 aa8.8□□□□□ -1
USP54-205ENST00000424265 DIO2Q92813 273 aa8.8□□□□□ -1
USP54-205ENST00000424265 CXorf36Q9H7Y0 433 aa8.8□□□□□ -1
USP54-205ENST00000424265 RLIMQ9NVW2 624 aa8.8□□□□□ -1
USP54-205ENST00000424265 BOKQ9UMX3 212 aaPredicted RBP8.8□□□□□ -1
USP54-205ENST00000424265 SH2B3Q9UQQ2 575 aa8.8□□□□□ -1
USP54-205ENST00000424265 FBXO24O75426 580 aa8.79□□□□□ -1
USP54-205ENST00000424265 STK17BO94768 372 aa8.79□□□□□ -1
USP54-205ENST00000424265 SOD3P08294 240 aa8.79□□□□□ -1
USP54-205ENST00000424265 CSF1P09603 554 aa8.79□□□□□ -1
USP54-205ENST00000424265 PMS2P11Q13670 270 aa8.79□□□□□ -1
USP54-205ENST00000424265 OR13D1Q8NGV5 346 aa8.79□□□□□ -1
USP54-205ENST00000424265 OR8S1Q8NH09 359 aa8.79□□□□□ -1
USP54-205ENST00000424265 DPH1Q9BZG8 443 aa8.79□□□□□ -1
USP54-205ENST00000424265 LSM2Q9Y333 95 aaKnown RBP8.79□□□□□ -1
USP54-205ENST00000424265 PRAMEF27A3QJZ7 478 aa8.79□□□□□ -1
USP54-205ENST00000424265 PRAMEF25A6NGN4 478 aa8.79□□□□□ -1
USP54-205ENST00000424265 GEMIN2O14893 280 aaKnown RBP8.79□□□□□ -1
USP54-205ENST00000424265 ZNF264O43296 627 aa8.79□□□□□ -1
USP54-205ENST00000424265 PRAMEF4O60810 478 aa8.79□□□□□ -1
USP54-205ENST00000424265 RBMXL2O75526 392 aaKnown RBP8.79□□□□□ -1
USP54-205ENST00000424265 ARL6IP5O75915 188 aa8.79□□□□□ -1
USP54-205ENST00000424265 IRF2P14316 349 aa8.79□□□□□ -1
USP54-205ENST00000424265 RPS26P62854 115 aaKnown RBP8.79□□□□□ -1
USP54-205ENST00000424265 HSF1Q00613 529 aa8.79□□□□□ -1
USP54-205ENST00000424265 PRAMEF9Q5VWM5 478 aa8.79□□□□□ -1
USP54-205ENST00000424265 OR13C5Q8NGS8 318 aa8.79□□□□□ -1
USP54-205ENST00000424265 THEM6Q8WUY1 208 aa8.79□□□□□ -1
USP54-205ENST00000424265 UBL7Q96S82 380 aaPredicted RBP8.79□□□□□ -1
USP54-205ENST00000424265 TAS2R8Q9NYW2 309 aa8.79□□□□□ -1
USP54-205ENST00000424265 OR52A1Q9UKL2 312 aa8.79□□□□□ -1
USP54-205ENST00000424265 PPP1R3CQ9UQK1 317 aa8.79□□□□□ -1
USP54-205ENST00000424265 DOCK8Q8NF50 2099 aa8.79□□□□□ -1
USP54-205ENST00000424265 PTPRSQ13332 1948 aa8.79□□□□□ -1
USP54-205ENST00000424265 TMEM129A0AVI4 362 aa8.79□□□□□ -1
USP54-205ENST00000424265 DHRS7CA6NNS2 312 aa8.79□□□□□ -1
USP54-205ENST00000424265 ETHE1O95571 254 aa8.79□□□□□ -1
USP54-205ENST00000424265 FOLR1P15328 257 aa8.79□□□□□ -1
USP54-205ENST00000424265 MC5RP33032 325 aa8.79□□□□□ -1
USP54-205ENST00000424265 RIPPLY3P57055 190 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms