RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 C16orf95Q9H693 158 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 EGLN3Q9H6Z9 239 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 SNTG1Q9NSN8 517 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 CENPMQ9NSP4 180 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 FOXJ3Q9UPW0 622 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 FAM96BQ9Y3D0 163 aa6.65□□□□□ -1.34
VIM-202ENST00000421459 FAM32AQ9Y421 112 aaKnown RBP6.65□□□□□ -1.34
VIM-202ENST00000421459 BHLHE40O14503 412 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 ARPC3O15145 178 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 GYPBP06028 91 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 CSF1P09603 554 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 ZNF823P16415 610 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 NOS3P29474 1203 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 SLC6A6P31641 620 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 NUDT2P50583 147 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 GNGT1P63211 74 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 SPIBQ01892 262 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 GABPB1Q06547 395 aaPredicted RBP6.64□□□□□ -1.35
VIM-202ENST00000421459 KCNJ8Q15842 424 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 LY6EQ16553 131 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 BEAN1Q3B7T3 259 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 TEX36Q5VZQ5 186 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 DHRS7BQ6IAN0 325 aaPredicted RBP6.64□□□□□ -1.35
VIM-202ENST00000421459 GDPGP1Q6ZNW5 385 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 C1orf122Q6ZSJ8 110 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 DCXRQ7Z4W1 244 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 LINC00471Q8N535 108 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 ZNF511Q8NB15 262 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 OR9Q1Q8NGQ5 310 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 RORBQ92753 470 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 SPTSSAQ969W0 71 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 DHRS1Q96LJ7 313 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 DDOQ99489 341 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 HOPXQ9BPY8 73 aaPredicted RBP6.64□□□□□ -1.35
VIM-202ENST00000421459 COPS4Q9BT78 406 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 WDR13Q9H1Z4 485 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 DPAGT1Q9H3H5 408 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 TOR3AQ9H497 397 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 DCAF13Q9NV06 445 aaKnown RBP6.64□□□□□ -1.35
VIM-202ENST00000421459 MRPL15Q9P015 296 aaKnown RBP6.64□□□□□ -1.35
VIM-202ENST00000421459 ZNRD1Q9P1U0 126 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 ZNF319Q9P2F9 582 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 KAAG1Q9UBP8 84 aa6.64□□□□□ -1.35
VIM-202ENST00000421459 MEIOCA2RUB1 952 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 MEGF11A6BM72 1044 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 CDIPTO14735 213 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 NPFFO15130 113 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 TBX1O43435 398 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 NDUFA2O43678 99 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 TSPAN9O75954 239 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 GADD45GO95257 159 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 ECDO95905 644 aaPredicted RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 SEMG1P04279 462 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 SPARCP09486 303 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 CLUP10909 449 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 OTX1P32242 354 aaPredicted RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 PSME3P61289 254 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 RPL15P61313 204 aaKnown RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 FAM3AP98173 230 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 KRT72Q14CN4 511 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 FAM189A2Q15884 450 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 MICBQ29980 383 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 GFOD2Q3B7J2 385 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 KLHL12Q53G59 568 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 FBLN7Q53RD9 439 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 WDR82Q6UXN9 313 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 Q6ZPA2 131 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 DPY19L4Q7Z388 723 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 ARPINQ7Z6K5 226 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 PLPP7Q8NBV4 271 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 PROKR2Q8NFJ6 384 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 OR1M1Q8NGA1 313 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 OR8D4Q8NGM9 314 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 OR8S1Q8NH09 359 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 H1FXQ92522 213 aaKnown RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 RPL3LQ92901 407 aaKnown RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 TNFRSF14Q92956 283 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 SGK3Q96BR1 496 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 SLAMF6Q96DU3 332 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 FGF23Q9GZV9 251 aaPredicted RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 SLC22A4Q9H015 551 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 ELL3Q9HB65 397 aaPredicted RBP6.63□□□□□ -1.35
VIM-202ENST00000421459 ZNF391Q9UJN7 358 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 AP3M1Q9Y2T2 418 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 RHBDD3Q9Y3P4 386 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 KPTNQ9Y664 436 aa6.63□□□□□ -1.35
VIM-202ENST00000421459 A0A1B0GVI7 797 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 ANKRD61A6NGH8 418 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 ZNF593O00488 134 aaPredicted RBP6.62□□□□□ -1.35
VIM-202ENST00000421459 NDUFB3O43676 98 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 ANXA2P07355 339 aaKnown RBP6.62□□□□□ -1.35
VIM-202ENST00000421459 FBP1P09467 338 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 RRM2P31350 389 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 SAA4P35542 130 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 GSSP48637 474 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 TGM4P49221 684 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 CX3CR1P49238 355 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 ERVFRD-1P60508 538 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 PPP1R8Q12972 351 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms