RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ELL3Q9HB65 397 aaPredicted RBP13.45□□□□□ -0.26
SEMA3B-203ENST00000419007 ACKR4Q9NPB9 350 aa13.45□□□□□ -0.26
SEMA3B-203ENST00000419007 KLRF1Q9NZS2 232 aa13.45□□□□□ -0.26
SEMA3B-203ENST00000419007 ASH2LQ9UBL3 628 aa13.45□□□□□ -0.26
SEMA3B-203ENST00000419007 CD38P28907 300 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 CX3CR1P49238 355 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 MFAP5Q13361 173 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 TMPRSS9Q7Z410 1059 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 C8orf33Q9H7E9 229 aaPredicted RBP13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 NME1P15531 152 aaKnown RBP13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 NFYBP25208 207 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 DHPSP49366 369 aaPredicted RBP13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 HFEQ30201 348 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 OR4A4PQ8NGN8 299 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 MFSD8Q8NHS3 518 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 DDIT4LQ96D03 193 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 NMES1Q9C002 83 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 TMEM14DPA8MWL7 114 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 RER1O15258 196 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 FGF16O43320 207 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 RAD51DO75771 328 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 SERPINA5P05154 406 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 HIST1H1DP16402 221 aaKnown RBP13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 GLRA1P23415 457 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 FOXK1P85037 733 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 RAB32Q13637 225 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 RAB11FIP2Q7L804 512 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 SLC30A7Q8NEW0 376 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 OR10C1Q96KK4 312 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 FLVCR1Q9Y5Y0 555 aa13.44□□□□□ -0.26
SEMA3B-203ENST00000419007 A0A1W2PNR3 127 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 DBX1A6NMT0 343 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 CDC14BO60729 498 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 FBXO24O75426 580 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 SCGNO76038 276 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 NME2P22392 152 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 ANOS1P23352 680 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 LAP3P28838 519 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF121P58317 390 aaPredicted RBP13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 CSNK2A1P68400 391 aaPredicted RBP13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 C17orf67Q0P5P2 114 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 PCK2Q16822 640 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 ANKRD55Q3KP44 614 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 C5orf46Q6UWT4 87 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 CSNK2A3Q8NEV1 391 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 STOML3Q8TAV4 291 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 TMEM230Q96A57 120 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 CYTL1Q9NRR1 136 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 GPR27Q9NS67 375 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 CHRM2P08172 466 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 TBPP20226 339 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF283Q8N7M2 679 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 OR51T1Q8NGJ9 327 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 KCNG3Q8TAE7 436 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 UQCC1Q9NVA1 299 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 EHFQ9NZC4 300 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 GPR132Q9UNW8 380 aa13.43□□□□□ -0.26
SEMA3B-203ENST00000419007 F8VVB4 439 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 F8VWA3 439 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 SNAPINO95295 136 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 MPZP25189 248 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 TMEM50BP56557 158 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 PGAP1Q75T13 922 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 TSTD1Q8NFU3 115 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 OR8B12Q8NGG6 310 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 MVB12AQ96EY5 273 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 CDC6Q99741 560 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF319Q9P2F9 582 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 LHFPL6Q9Y693 200 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 CPAMD8Q8IZJ3 1885 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 FER1L5A0AVI2 2057 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF98A6NK75 572 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 LRP3O75074 770 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 SFT2D2O95562 160 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 SHEQ5VZ18 495 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 DRAM2Q6UX65 266 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 C12orf57Q99622 126 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 PARP12Q9H0J9 701 aaKnown RBP13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 SLC22A11Q9NSA0 550 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF701Q9NV72 531 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 ANKUB1A6NFN9 424 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 METTL12A8MUP2 240 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF878C9JN71 531 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 MED6O75586 246 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 RCC1P18754 421 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 SFTPDP35247 375 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 APOBEC1P41238 236 aaKnown RBP13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 PDZK1IP1Q13113 114 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 MYBPHQ13203 477 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 C14orf28Q4W4Y0 310 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 UEVLDQ8IX04 471 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 ST8SIA1Q92185 356 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 CMSS1Q9BQ75 279 aaKnown RBP13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 RHOFQ9HBH0 211 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 MMP26Q9NRE1 261 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 FGF21Q9NSA1 209 aa13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 RPH3AQ9Y2J0 694 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-203ENST00000419007 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms