RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 IGHV4-61A0A0C4DH41 118 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 GGT3PA6NGU5 568 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 METTL15A6NJ78 407 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 H0YHG0 523 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 KRT8P05787 483 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 TNFSF4P23510 183 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 AQP4P55087 323 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 TMEM33P57088 247 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 MAB21L1Q13394 359 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 LIPNQ5VXI9 398 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 ELMOD2Q8IZ81 293 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 ACBD7Q8N6N7 88 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 PLPP7Q8NBV4 271 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 MAPK1IP1LQ8NDC0 245 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 SPRYD4Q8WW59 207 aaPredicted RBP15.77■□□□□ 0.12
PTCD3-204ENST00000418628 MEGF10Q96KG7 1140 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 SIGLEC11Q96RL6 698 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 AMBNQ9NP70 447 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 MYRFQ9Y2G1 1151 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 RPL36Q9Y3U8 105 aaKnown RBP15.77■□□□□ 0.12
PTCD3-204ENST00000418628 N6AMT1Q9Y5N5 214 aa15.77■□□□□ 0.12
PTCD3-204ENST00000418628 F5H5P2 479 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 LOC110117498-PIK3R3F6TDL0 507 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 CDC14BO60729 498 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 FAM20BO75063 409 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 ATP6V1G2O95670 118 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 HLA-DPB1P04440 258 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 TNFRSF1AP19438 455 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 CCL1P22362 96 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 USF1P22415 310 aaPredicted RBP15.76■□□□□ 0.11
PTCD3-204ENST00000418628 ATP6V1E1P36543 226 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 CARTPTQ16568 116 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 CATSPERDQ86XM0 798 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 KLBQ86Z14 1044 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 EGFL6Q8IUX8 553 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 CSNK2A3Q8NEV1 391 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 OR52I1Q8NGK6 324 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 RORBQ92753 470 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 SMR3AQ99954 134 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 ADAT1Q9BUB4 502 aaKnown RBP15.76■□□□□ 0.11
PTCD3-204ENST00000418628 FGF20Q9NP95 211 aaPredicted RBP15.76■□□□□ 0.11
PTCD3-204ENST00000418628 INPP5EQ9NRR6 644 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 ACOXLQ9NUZ1 547 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 SNX5Q9Y5X3 404 aa15.76■□□□□ 0.11
PTCD3-204ENST00000418628 ANK3Q12955 4377 aaKnown RBP15.75■□□□□ 0.11
PTCD3-204ENST00000418628 SETD2Q9BYW2 2564 aaPredicted RBP15.75■□□□□ 0.11
PTCD3-204ENST00000418628 SMAD7O15105 426 aaKnown RBP15.75■□□□□ 0.11
PTCD3-204ENST00000418628 GMDSO60547 372 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 CA6P23280 308 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 ZNF181Q2M3W8 571 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 GFOD2Q3B7J2 385 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 FDX2Q6P4F2 183 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 C8orf59Q8N0T1 100 aaPredicted RBP15.75■□□□□ 0.11
PTCD3-204ENST00000418628 YIPF7Q8N8F6 280 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 PPP1R14AQ96A00 147 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 GCM1Q9NP62 436 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 DCAF16Q9NXF7 216 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 OR52A1Q9UKL2 312 aa15.75■□□□□ 0.11
PTCD3-204ENST00000418628 NOP16Q9Y3C1 178 aaKnown RBP15.75■□□□□ 0.11
PTCD3-204ENST00000418628 A0A1B0GTI1 187 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 TPD52L2O43399 206 aaKnown RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 FADS2O95864 444 aaKnown RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 ATP6V1B1P15313 513 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 GPR6P46095 362 aaPredicted RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 SRP9P49458 86 aaKnown RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 HNRNPA0Q13151 305 aaKnown RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 GALEQ14376 348 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 TMEM249Q2WGJ8 235 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 HFEQ30201 348 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 TP53I3Q53FA7 332 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 KCTD20Q7Z5Y7 419 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 SYS1Q8N2H4 156 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 PRSS35Q8N3Z0 413 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 OR51E1Q8TCB6 317 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 Q8TCH9 128 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 DVL3Q92997 716 aaPredicted RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 C1orf159Q96HA4 380 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 GSX1Q9H4S2 264 aaPredicted RBP15.74■□□□□ 0.11
PTCD3-204ENST00000418628 GPR84Q9NQS5 396 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 ERVK13-1Q9NX77 482 aa15.74■□□□□ 0.11
PTCD3-204ENST00000418628 DAPL1A0PJW8 107 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 CLDN25C9JDP6 229 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 WNT9BO14905 357 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 CST4P01036 141 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 HEXAP06865 529 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 LIMS3P0CW19 117 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 LIMS4P0CW20 117 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 KIR3DL2P43630 455 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 OR12D2P58182 307 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 ACTA2P62736 377 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 ACTG2P63267 376 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 OR8G1Q15617 311 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 SNCBQ16143 134 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 KLHL22Q53GT1 634 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 WDR38Q5JTN6 314 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 BCL2L15Q5TBC7 163 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 ZBTB37Q5TC79 503 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 ZNF771Q7L3S4 317 aaPredicted RBP15.73■□□□□ 0.11
PTCD3-204ENST00000418628 FAM220AQ7Z4H9 259 aa15.73■□□□□ 0.11
PTCD3-204ENST00000418628 ITPKCQ96DU7 683 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms