RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SLC34A1Q06495 639 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 IL18R1Q13478 541 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 OR8B8Q15620 311 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 BCL2L15Q5TBC7 163 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 PLEKHG7Q6ZR37 379 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 C1orf87Q8N0U7 546 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 RFLNBQ8N5W9 214 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 OR8S1Q8NH09 359 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 RHOXF1Q8NHV9 184 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 RAB39BQ96DA2 213 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 PAPOLGQ9BWT3 736 aaKnown RBP9.23□□□□□ -0.93
CHMP3-205ENST00000409810 PBOV1Q9GZY1 135 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 VCX3BQ9H321 246 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 C14orf119Q9NWQ9 140 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 NUFIP1Q9UHK0 495 aaKnown RBP9.23□□□□□ -0.93
CHMP3-205ENST00000409810 MRM2Q9UI43 246 aaKnown RBP9.23□□□□□ -0.93
CHMP3-205ENST00000409810 GTF2A1LQ9UNN4 478 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 RPL36Q9Y3U8 105 aaKnown RBP9.23□□□□□ -0.93
CHMP3-205ENST00000409810 WIPI2Q9Y4P8 454 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 SNX5Q9Y5X3 404 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 NPTNQ9Y639 398 aa9.23□□□□□ -0.93
CHMP3-205ENST00000409810 DAPL1A0PJW8 107 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 IRGMA1A4Y4 181 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ISPDA4D126 451 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 LRP5LA4QPB2 252 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 PRR32B1ATL7 298 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 H0YAE9 185 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 H0YL77 283 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 DLGAP1O14490 977 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 FADS2O95864 444 aaKnown RBP9.22□□□□□ -0.93
CHMP3-205ENST00000409810 HLA-DPB1P04440 258 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 IGHV4-31P0DP07 118 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 MAP2K3P46734 347 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ACTA2P62736 377 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ACTG2P63267 376 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 MVKQ03426 396 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF91Q05481 1191 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 RAB40BQ12829 278 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF181Q2M3W8 571 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 KLHL22Q53GT1 634 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 SPRNQ5BIV9 151 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF691Q5VV52 312 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 SSX6Q7RTT6 188 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 KCTD20Q7Z5Y7 419 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ACBD7Q8N6N7 88 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 OR11L1Q8NGX0 322 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 GAL3ST1Q99999 423 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ADI1Q9BV57 179 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 NARFLQ9H6Q4 476 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 FN3KRPQ9HA64 309 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 RNPEPL1Q9HAU8 725 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 GCM1Q9NP62 436 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 INPP5EQ9NRR6 644 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 TREM2Q9NZC2 230 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ZNF319Q9P2F9 582 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 GNG8Q9UK08 70 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 OR52A1Q9UKL2 312 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 EXOGQ9Y2C4 368 aaKnown RBP9.22□□□□□ -0.93
CHMP3-205ENST00000409810 CACNG2Q9Y698 323 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 HSPE1-MOB4S4R3N1 261 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 ABCA2Q9BZC7 2435 aa9.22□□□□□ -0.93
CHMP3-205ENST00000409810 WNK2Q9Y3S1 2297 aa9.21□□□□□ -0.93
CHMP3-205ENST00000409810 C2CD3Q4AC94 2353 aa9.21□□□□□ -0.93
CHMP3-205ENST00000409810 DHRS3O75911 302 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 RPP14O95059 124 aaKnown RBP9.21□□□□□ -0.94
CHMP3-205ENST00000409810 CAPGP40121 348 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 CDH15P55291 814 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF85Q03923 595 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 KRTAP1-1Q07627 177 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 MFGE8Q08431 387 aaPredicted RBP9.21□□□□□ -0.94
CHMP3-205ENST00000409810 MAB21L1Q13394 359 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 CDONQ4KMG0 1287 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 C6orf52Q5T4I8 152 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 AVPI1Q5T686 147 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 ZBTB37Q5TC79 503 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 LIPNQ5VXI9 398 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 FAM166AQ6J272 317 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 Q71RC1 249 aaPredicted RBP9.21□□□□□ -0.94
CHMP3-205ENST00000409810 THAP5Q7Z6K1 395 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 MUC20Q8N307 709 aaPredicted RBP9.21□□□□□ -0.94
CHMP3-205ENST00000409810 SPICQ8N5J4 248 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 SEMA6DQ8NFY4 1073 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 CLDND2Q8NHS1 167 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 APH1BQ8WW43 257 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 LGALS12Q96DT0 336 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 SIGLEC11Q96RL6 698 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 MICU1Q9BPX6 476 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 GPR84Q9NQS5 396 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 YAE1D1Q9NRH1 226 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 AASSQ9UDR5 926 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 KCNS2Q9ULS6 477 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 MPC1Q9Y5U8 109 aa9.21□□□□□ -0.94
CHMP3-205ENST00000409810 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 SONP18583 2426 aaKnown RBP9.2□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF816-ZNF321PA0A0X1KG74 233 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 A6NLC8 198 aa9.2□□□□□ -0.94
CHMP3-205ENST00000409810 A8MV72 311 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms