RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	FAM60A	Q9NP50	221 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MBD1	Q9UIS9	605 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RAB19	A4D1S5	217 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	EIF3I	Q13347	325 aa	Known RBP	11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PELI1	Q96FA3	418 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OPA3	Q9H6K4	179 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	KPTN	Q9Y664	436 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MKRN2OS	H3BPM6	223 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SPRY1	O43609	319 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MPL	P40238	635 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RAB35	Q15286	201 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MAMSTR	Q6ZN01	415 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SMIM15	Q7Z3B0	74 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	WFDC8	Q8IUA0	241 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	VPS25	Q9BRG1	176 aa		11.95	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZFP92	A6NM28	416 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GAL	P22466	123 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GUCA2A	Q02747	115 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	BAMBI	Q13145	260 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NAA40	Q86UY6	237 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DTWD2	Q8NBA8	298 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR11G2	Q8NGC1	345 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C4orf45	Q96LM5	186 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PARP12	Q9H0J9	701 aa	Known RBP	11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C5orf67	F2Z3F1	127 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PLPP2	O43688	288 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MT-CO3	P00414	261 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CRYBB2	P43320	205 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GPR12	P47775	334 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	LINC00303	Q3SY05	128 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ABI3BP	Q7Z7G0	1075 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TMED6	Q8WW62	240 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	BTF3L4	Q96K17	158 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ADGRL4	Q9HBW9	690 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SERPINE3	A8MV23	424 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454		F6UZH7	168 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	H2AFB1	P0C5Y9	115 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DMRTC1	Q5HYR2	192 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR2B11	Q5JQS5	317 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NRTN	Q99748	197 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR6C68	A6NDL8	312 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TOR2A	Q5JU69	321 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	AVPI1	Q5T686	147 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C2orf50	Q96LR7	162 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PLEKHA2	Q9HB19	425 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	HLA-H	P01893	362 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR13C7	P0DN81	318 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GZMK	P49863	264 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SSX1	Q16384	188 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ADIPOR1	Q96A54	375 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	LRP3	O75074	770 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CD1B	P29016	333 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RPL12	P30050	165 aa	Known RBP	11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ADIRF	Q15847	76 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RNF32	Q9H0A6	362 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PLA2G3	Q9NZ20	509 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CCDC88C	Q9P219	2028 aa		11.94	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ALX3	O95076	343 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SPN	P16150	400 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TECTB	Q96PL2	329 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CCL27	Q9Y4X3	112 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	COL4A1	P02462	1669 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NUDT19	A8MXV4	375 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PRSS23	O95084	383 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TRIL	Q7L0X0	811 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C15orf54	Q8N8G6	183 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GNRHR2	Q96P88	292 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SUB1	P53999	127 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MRM1	Q6IN84	353 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C1orf87	Q8N0U7	546 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SMCO4	Q9NRQ5	59 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DHODH	Q02127	395 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FUT7	Q11130	342 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	THSD4	Q6ZMP0	1018 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SLC25A32	Q9H2D1	315 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C12orf10	Q9HB07	376 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	AK3	Q9UIJ7	227 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FBXL4	Q9UKA2	621 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	LOXHD1	Q8IVV2	1947 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ACKR3	P25106	362 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FCER1G	P30273	86 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TAGLN2	P37802	199 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	APH1B	Q8WW43	257 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TRGV5	A0A0B4J1U4	118 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454		E5RGE8	158 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GSK3A	P49840	483 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SPANXN5	Q5MJ07	72 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZNF321P	Q8N8H1	164 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR8D4	Q8NGM9	314 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TERB2	Q8NHR7	220 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ST8SIA4	Q92187	359 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	WDFY2	Q96P53	400 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NSG2	Q9Y328	171 aa		11.93	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SCAF4	O95104	1147 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DEFA4	P12838	97 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NOVA1	P51513	510 aa	Known RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms