RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 UMPSP11172 480 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ICAM2P13598 275 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TNNI3P19429 210 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 GGT1P19440 569 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TCN2P20062 427 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 LCN1P31025 176 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CRATP43155 626 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 PPICP45877 212 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 HTR5AP47898 357 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 EMDP50402 254 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR4D2P58180 307 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 BPIFB3P59826 476 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ACTR3P61158 418 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CDK6Q00534 326 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 DMTNQ08495 405 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 EIF2B1Q14232 305 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 SELPLGQ14242 412 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 FLOT2Q14254 428 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNHIT3Q15649 155 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CYP51A1Q16850 503 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 Q1RN00 199 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TRMT12Q53H54 448 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 SFT2D3Q587I9 215 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ATAD3CQ5T2N8 411 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ATAD3BQ5T9A4 648 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 LCN8Q6JVE9 175 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 FAM199XQ6PEV8 388 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TMEM107Q6UX40 140 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF562Q6V9R5 426 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 LRRC74BQ6ZQY2 392 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 LANCL3Q6ZV70 420 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CCDC80Q76M96 950 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ANKRD37Q7Z713 158 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 DHFR2Q86XF0 187 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 MARCH9Q86YJ5 346 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 RAB43Q86YS6 212 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 MICU2Q8IYU8 434 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 C10orf111Q8N326 155 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 KIF2BQ8N4N8 673 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 FAM71CQ8NEG0 241 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 NFAM1Q8NET5 270 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR8K3Q8NH51 312 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR5AK3PQ8NH89 298 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 NUBPLQ8TB37 319 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 FNDC8Q8TC99 324 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF721Q8TF20 911 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CT55Q8WUE5 264 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TSLPQ969D9 159 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 NCLNQ969V3 563 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 PPWD1Q96BP3 646 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 DUS3LQ96G46 650 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 IMMP1LQ96LU5 166 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 RNF145Q96MT1 663 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 VSTM2LQ96N03 204 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 TRNT1Q96Q11 434 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR7D2Q96RA2 312 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 BCL2L10Q9HD36 194 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 POLE3Q9NRF9 147 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 PNO1Q9NRX1 252 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 EXD2Q9NVH0 621 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CALML5Q9NZT1 146 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 RRP15Q9Y3B9 282 aaKnown RBP3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 CACNA1AO00555 2505 aa3.74□□□□□ -1.81
HMGB3P19-201ENST00000403971 GTF3C1Q12789 2109 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 KIAA1549Q9HCM3 1950 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 IGHV1-45A0A0A0MS14 117 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 TCRBV3S1A0A5B6 114 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 FRG2CA6NGY1 282 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 H0YHG0 523 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 CXCR6O00574 342 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 ACOX3O15254 700 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 TSC22D2O75157 780 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 FKBP6O75344 327 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 STX11O75558 287 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 IFNA14P01570 189 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 C1QCP02747 245 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 CLPSP04118 112 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 ALOX5P09917 674 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 OR12D1P0DN82 309 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 COX6A1P12074 109 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 ETS2P15036 469 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 DRD5P21918 477 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 KDELR2P33947 212 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 DLSTP36957 453 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 ARHGDIBP52566 201 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 CRISP3P54108 245 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 PSMD4P55036 377 aaKnown RBP3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 GMFBP60983 142 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 PAX2Q02962 417 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 FUT5Q11128 374 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZP4Q12836 540 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 RIPK1Q13546 671 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 EBPQ15125 230 aaKnown RBP3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 MICAQ29983 383 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 ARHGAP11BQ3KRB8 267 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 C1orf146Q5VVC0 180 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 DMKNQ6E0U4 476 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 GLYATQ6IB77 296 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 REEP3Q6NUK4 255 aa3.73□□□□□ -1.81
HMGB3P19-201ENST00000403971 H3F3CQ6NXT2 135 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms