RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DSCAMO60469 2012 aa28.47■■■□□ 2.15
CSNK1E-204ENST00000403904 B9A039 149 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 LILRA1O75019 489 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 DHRS3O75911 302 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 ACHEP22303 614 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 EVX1P49640 407 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 KRTAP10-9P60411 292 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 TPBGQ13641 420 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 OR8B8Q15620 311 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 RGP1Q92546 391 aaPredicted RBP28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 HHLA2Q9UM44 414 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 ZNF281Q9Y2X9 895 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 BAHCC1Q9P281 2608 aa28.46■■■□□ 2.15
CSNK1E-204ENST00000403904 MTRF1O75570 445 aaKnown RBP28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 SELEP16581 610 aa28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 TSTQ16762 297 aaKnown RBP28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 SWI5Q1ZZU3 235 aa28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 AGAP6Q5VW22 663 aa28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 OR14K1Q8NGZ2 314 aa28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 VCX3AQ9NNX9 186 aa28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 LAMP3Q9UQV4 416 aa28.45■■■□□ 2.15
CSNK1E-204ENST00000403904 LOC390937A0A1W2PQ73 354 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 IQCF6A8MYZ5 107 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 LMX1BO60663 402 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 CD8AP01732 235 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 CPEP16870 476 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 MAP2K3P46734 347 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 V9GYS6 101 aa28.45■■■□□ 2.14
CSNK1E-204ENST00000403904 ARFGEF3Q5TH69 2177 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 CD1AP06126 327 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 ALDH3B1P43353 468 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 MAGEB1P43366 347 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 GPR50Q13585 617 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 NKPD1Q17RQ9 610 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 SEMA6DQ8NFY4 1073 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 OR13C5Q8NGS8 318 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 MUL1Q969V5 352 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 CBLN4Q9NTU7 201 aa28.44■■■□□ 2.14
CSNK1E-204ENST00000403904 A6NIN4 97 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 DDOSTP39656 456 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 MMP15P51511 669 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 SYT6Q5T7P8 510 aaPredicted RBP28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 Q6ZSR3 168 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 DTX2Q86UW9 622 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 PHC2Q8IXK0 858 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 NRGNQ92686 78 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 MRPS26Q9BYN8 205 aaKnown RBP28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 LIME1Q9H400 295 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 PIGLQ9Y2B2 252 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 ABCA12Q86UK0 2595 aa28.43■■■□□ 2.14
CSNK1E-204ENST00000403904 GP2P55259 537 aaKnown RBP28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 C20orf204Q6ZNR8 217 aa28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 OR8G5Q8NG78 346 aa28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 GTF3AQ92664 365 aaKnown RBP28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 TMED9Q9BVK6 235 aa28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 MSL2Q9HCI7 577 aa28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 APCP25054 2843 aa28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 CACNA1DQ01668 2161 aa28.42■■■□□ 2.14
CSNK1E-204ENST00000403904 FAHP16930 419 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 RPS11P62280 158 aaKnown RBP eCLIP28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 RIPPLY1Q0D2K3 151 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 SSX1Q16384 188 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 MOGQ16653 247 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 OR13C3Q8NGS6 347 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 GPR148Q8TDV2 347 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 TRAF4Q9BUZ4 470 aaPredicted RBP28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 UNC79Q9P2D8 2635 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 SPG11Q96JI7 2443 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 PLSCR5A0PG75 271 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 LIPAP38571 399 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 SNRPD2P62316 118 aaKnown RBP28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 YIF1BQ5BJH7 314 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 C11orf71Q6IPW1 123 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 CSNK2A3Q8NEV1 391 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 TSEN15Q8WW01 171 aaKnown RBP28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 TMEM203Q969S6 136 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 RHBDD3Q9Y3P4 386 aa28.41■■■□□ 2.14
CSNK1E-204ENST00000403904 M0R233 179 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 NAT2P11245 290 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 ZNF12P17014 697 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 Q6ZR03 302 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 CCDC54Q8NEL0 328 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 PLEKHA1Q9HB21 404 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 GPR160Q9UJ42 338 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 DHDHQ9UQ10 334 aa28.4■■■□□ 2.14
CSNK1E-204ENST00000403904 JUNBP17275 347 aaPredicted RBP28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 SOX2P48431 317 aa28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 RPS25P62851 125 aaKnown RBP28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 ZCCHC24Q8N2G6 241 aaKnown RBP28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 FGGYQ96C11 551 aa28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 PPP1R3EQ9H7J1 279 aa28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 DYNLRB1Q9NP97 96 aa28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 ZNF275Q9NSD4 429 aaPredicted RBP28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 MRPL15Q9P015 296 aaKnown RBP28.39■■■□□ 2.14
CSNK1E-204ENST00000403904 ZSCAN5BA6NJL1 495 aa28.38■■■□□ 2.13
CSNK1E-204ENST00000403904 DHRS7CA6NNS2 312 aa28.38■■■□□ 2.13
CSNK1E-204ENST00000403904 OCM2P0CE71 109 aa28.38■■■□□ 2.13
CSNK1E-204ENST00000403904 CA6P23280 308 aa28.38■■■□□ 2.13
CSNK1E-204ENST00000403904 SLC30A2Q9BRI3 323 aa28.38■■■□□ 2.13
CSNK1E-204ENST00000403904 TMEM100Q9NV29 134 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms