RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 STEAP2Q8NFT2 490 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR4D6Q8NGJ1 314 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 UQCC2Q9BRT2 126 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 KLHL13Q9P2N7 655 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MGAQ8IWI9 3026 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 A0A1B0GTI1 187 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 A0A1W2PNV4 684 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TMEM235A6NFC5 223 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LIPT2A6NK58 231 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LMX1BO60663 402 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MPGP29372 298 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FOXF1Q12946 379 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR1C1Q15619 314 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR10K2Q6IF99 312 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZNF813Q6ZN06 617 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR5M8Q8NGP6 311 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 C11orf40Q8WZ69 217 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FGGYQ96C11 551 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SLAMF6Q96DU3 332 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CXorf58Q96LI9 332 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 NPAS1Q99742 590 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PPA2Q9H2U2 334 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TRAV14DV4A0A0A6YYC5 116 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 IGKV1D-43A0A0B4J1Z2 117 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 KRBOX1C9JBD0 128 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MKRN2OSH3BPM6 223 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 F10P00742 488 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 UBBP0CG47 229 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CCL3P10147 92 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MSX1P28360 303 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CD34P28906 385 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PTGDSP41222 190 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 RPS27AP62979 156 aaKnown RBP14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 UBA52P62987 128 aaKnown RBP14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ARG2P78540 354 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DHRS2Q13268 280 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZNF260Q3ZCT1 412 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 RNASE10Q5GAN6 216 aaKnown RBP14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZNF660Q6AZW8 331 aaPredicted RBP14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LIN54Q6MZP7 749 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ARSKQ6UWY0 536 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OVCH2Q7RTZ1 564 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FJX1Q86VR8 437 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 WDFY1Q8IWB7 410 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PDZD9Q8IXQ8 264 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SLC22A24Q8N4F4 322 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ACBD4Q8NC06 268 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MDS2Q8NDY4 140 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR1M1Q8NGA1 313 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR5M9Q8NGP3 310 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR1J2Q8NGS2 313 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR13C8Q8NGS7 320 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 EXTL1Q92935 676 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SIGLEC12Q96PQ1 595 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SLC6A7Q99884 636 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 NUDT16L1Q9BRJ7 211 aaKnown RBP14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ANGPTL4Q9BY76 406 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PRORYQ9H606 182 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 METTL7AQ9H8H3 244 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CNTD2Q9H8S5 307 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MED29Q9NX70 200 aa14.05□□□□□ -0.16
CHRFAM7A-203ENST00000401522 A0A0D9SG52 128 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 C2orf72A6NCS6 295 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 A8MXK9 166 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 RAB27BO00194 218 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SYT7O43581 403 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TTRP02766 147 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 NUP62P37198 522 aaPredicted RBP14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 GSK3AP49840 483 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 BIDP55957 195 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CORO6Q6QEF8 472 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TRAPPC6BQ86SZ2 158 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZDHHC22Q8N966 263 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MRGPRX4Q96LA9 322 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZMAT3Q9HA38 289 aaKnown RBP14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PROK2Q9HC23 129 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 KLRF1Q9NZS2 232 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MYEF2Q9P2K5 600 aaKnown RBP14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FBLN5Q9UBX5 448 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CYB5R1Q9UHQ9 305 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 VDAC3Q9Y277 283 aa14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 RPH3AQ9Y2J0 694 aaPredicted RBP14.04□□□□□ -0.16
CHRFAM7A-203ENST00000401522 A0A1B0GW55 424 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR14I1A6ND48 311 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 EIF1AYO14602 144 aaKnown RBP14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 P04436 131 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ERCC1P07992 297 aaPredicted RBP14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DUX4L2P0CJ85 424 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DUX4L3P0CJ86 424 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DUX4L4P0CJ87 422 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DUX4L5P0CJ88 424 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DUX4L6P0CJ89 424 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DUX4L7P0CJ90 424 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MGMTP16455 207 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 GNALP38405 381 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TNFSF10P50591 281 aa14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZNF41P51814 821 aaPredicted RBP14.03□□□□□ -0.16
CHRFAM7A-203ENST00000401522 QRFPP83859 136 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms