RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 BTNL3Q6UXE8 466 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 KCNIP2Q9NS61 270 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 TUBAL3A6NHL2 446 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 AQP6Q13520 282 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 OR52I2Q8NH67 350 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 RND1Q92730 232 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 CMTM3Q96MX0 182 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 NUP205Q92621 2012 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 TMEM65Q6PI78 240 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 LTBP4Q8N2S1 1624 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 HLA-HP01893 362 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 CNR1P21554 472 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 C11orf54Q9H0W9 315 aaPredicted RBP10.2□□□□□ -0.78
TTC28-201ENST00000397906 ACOT8O14734 319 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 MGMTP16455 207 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 OR3A4PP47883 348 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 ADGRG3Q86Y34 549 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 SEH1LQ96EE3 360 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 DHRS9Q9BPW9 319 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 KLK4Q9Y5K2 254 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 MYO7AQ13402 2215 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 OR2F2O95006 317 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 CHRM2P08172 466 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 PATE4P0C8F1 98 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 PRR27Q6MZM9 219 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 ZNF774Q6NX45 483 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 TM4SF19Q96DZ7 209 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 HES4Q9HCC6 221 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 COL18A1P39060 1754 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 NME2P1O60361 137 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 CTRB1P17538 263 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 ACKR3P25106 362 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
TTC28-201ENST00000397906 ZXDAP98168 799 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 OR5I1Q13606 314 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 TMEM268Q5VZI3 342 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 CTRB2Q6GPI1 263 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 BAGE3Q86Y29 109 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 BAGE2Q86Y30 109 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 CELF2-AS1Q8N7Q2 184 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 RAB1BQ9H0U4 201 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 MLF1P58340 268 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 PCYT1BQ9Y5K3 369 aaPredicted RBP10.2□□□□□ -0.78
TTC28-201ENST00000397906 RER1O15258 196 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 COL13A1Q5TAT6 717 aaPredicted RBP10.2□□□□□ -0.78
TTC28-201ENST00000397906 WDR31Q8NA23 367 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 GATA6Q92908 595 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 TIMM9Q9Y5J7 89 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 TRIP11Q15643 1979 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 RPL7L1Q6DKI1 246 aaKnown RBP10.2□□□□□ -0.78
TTC28-201ENST00000397906 RPEQ96AT9 228 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 CSAG2Q9Y5P2 127 aa10.2□□□□□ -0.78
TTC28-201ENST00000397906 SUMO3P55854 103 aaPredicted RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 MYOZ1Q9NP98 299 aaPredicted RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 OR2A25A4D2G3 310 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 BHLHA15Q7RTS1 189 aaPredicted RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 ADAM19Q9H013 955 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 IGHV3-43A0A0B4J1X8 118 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 ZNF785A8K8V0 405 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 SOX15O60248 233 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 IGHV3-43DP0DP04 118 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 UBE2MP61081 183 aaKnown RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 PPP1CBP62140 327 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 OR2T6Q8NHC8 308 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 SOX7Q9BT81 388 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 ZNF835Q9Y2P0 537 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 HBE1P02100 147 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 PSD2Q9BQI7 771 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 B9D1Q9UPM9 204 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 TXNL1O43396 289 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 PMS2P2O95744 297 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 STAC2Q6ZMT1 411 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 KDF1Q8NAX2 398 aaPredicted RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 ST8SIA2Q92186 375 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 ERGIC1Q969X5 290 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 IGHV5-10-1A0A0J9YXX1 117 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 ONECUT2O95948 504 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 NPEPL1Q8NDH3 523 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 SLC25A46Q96AG3 418 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 MISP3Q96FF7 219 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 ZFP64Q9NPA5 681 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 PPIL1Q9Y3C6 166 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 CEACAM6P40199 344 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 DGCR2P98153 550 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 SNTB1Q13884 538 aaKnown RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 PRDM7Q9NQW5 492 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 LRP12Q9Y561 859 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 JAM3Q9BX67 310 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 DLL4Q9NR61 685 aa10.19□□□□□ -0.78
TTC28-201ENST00000397906 RBFOX1Q9NWB1 397 aaKnown RBP10.19□□□□□ -0.78
TTC28-201ENST00000397906 COX7A2P2O60397 106 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 FUT6P51993 359 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 PKMYT1Q99640 499 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 NDFIP1Q9BT67 221 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 FAM60AQ9NP50 221 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 MCM3APO60318 1980 aa10.18□□□□□ -0.78
TTC28-201ENST00000397906 SMCHD1A6NHR9 2005 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms