RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PLPP7Q8NBV4 271 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 OR56B2PQ8NGI1 322 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 OR10AC1Q8NH08 325 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 RAI1Q7Z5J4 1906 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 UNC79Q9P2D8 2635 aa20.2■□□□□ 0.82
TSPAN4-203ENST00000397397 LOC390937A0A1W2PQ73 354 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 B9A039 149 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 MAP2K3P46734 347 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 EVX1P49640 407 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 OR8B8Q15620 311 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 EFNB3Q15768 340 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 BHLHE23Q8NDY6 225 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 CCDC54Q8NEL0 328 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 OR14K1Q8NGZ2 314 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 RGP1Q92546 391 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 V9GYS6 101 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 CELSR2Q9HCU4 2923 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 IQCF6A8MYZ5 107 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 ZNF12P17014 697 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 JUNBP17275 347 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 ACKR3P25106 362 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 DDOSTP39656 456 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 GP2P55259 537 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 TNK1Q13470 666 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 MOGQ16653 247 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 NKPD1Q17RQ9 610 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 AGAP6Q5VW22 663 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 PHC2Q8IXK0 858 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 SEMA6DQ8NFY4 1073 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 OR51A4Q8NGJ6 313 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 OR13C3Q8NGS6 347 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 GPR148Q8TDV2 347 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 TSEN15Q8WW01 171 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 TMED9Q9BVK6 235 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 PIGLQ9Y2B2 252 aa20.19■□□□□ 0.82
TSPAN4-203ENST00000397397 CACNA1DQ01668 2161 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 DANCRP0C864 163 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 RIPPLY1Q0D2K3 151 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 MST1LQ2TV78 715 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 YIF1BQ5BJH7 314 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 Q6ZSR3 168 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 CSNK2A3Q8NEV1 391 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 OR13C5Q8NGS8 318 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 ITFG2Q969R8 447 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 GPR160Q9UJ42 338 aa20.18■□□□□ 0.82
TSPAN4-203ENST00000397397 HRNRQ86YZ3 2850 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 LMX1BO60663 402 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 LILRA1O75019 489 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 CD53P19397 219 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 SSX1Q16384 188 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 C20orf204Q6ZNR8 217 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 OR8G5Q8NG78 346 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 PLEKHA1Q9HB21 404 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 CBLN4Q9NTU7 201 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 DHDHQ9UQ10 334 aa20.17■□□□□ 0.82
TSPAN4-203ENST00000397397 ANKRD30BLA7E2S9 258 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 CCRL2O00421 344 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 SOD3P08294 240 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 FAHP16930 419 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 LIPAP38571 399 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 ALDH3B1P43353 468 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 MAGEB1P43366 347 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 SOX2P48431 317 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 SNRPD2P62316 118 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 RPS25P62851 125 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 SWI5Q1ZZU3 235 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 MS4A15Q8N5U1 240 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 TMEM203Q969S6 136 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 SCOCQ9UIL1 159 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 ENPP5Q9UJA9 477 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 LAMP3Q9UQV4 416 aa20.16■□□□□ 0.82
TSPAN4-203ENST00000397397 ZNF816-ZNF321PA0A0X1KG74 233 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 PLSCR5A0PG75 271 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 A6NIN4 97 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 DHRS7CA6NNS2 312 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 CD8AP01732 235 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 OCM2P0CE71 109 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 RPS11P62280 158 aaKnown RBP eCLIP20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 DTX2Q86UW9 622 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 FTMTQ8N4E7 242 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 GTF3AQ92664 365 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 FGGYQ96C11 551 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 TRAF4Q9BUZ4 470 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 MSL2Q9HCI7 577 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 DYNLRB1Q9NP97 96 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 CYSLTR2Q9NS75 346 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 ZNF275Q9NSD4 429 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 NDUFB11Q9NX14 153 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 MRPL15Q9P015 296 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 RHBDD3Q9Y3P4 386 aa20.15■□□□□ 0.82
TSPAN4-203ENST00000397397 TRBV5-5A0A0J9YX44 114 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 M0R233 179 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 ZNF20P17024 532 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 GABRA5P31644 462 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 MMP15P51511 669 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 TRAM1Q15629 374 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 ZBTB37Q5TC79 503 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 PIGCQ92535 297 aa20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 PAPOLGQ9BWT3 736 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-203ENST00000397397 TMEM100Q9NV29 134 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms