RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 BHLHE23Q8NDY6 225 aa18.21■□□□□ 0.51
FXN-202ENST00000396364 OR56B2PQ8NGI1 322 aa18.21■□□□□ 0.51
FXN-202ENST00000396364 NEU4Q8WWR8 484 aaPredicted RBP18.21■□□□□ 0.51
FXN-202ENST00000396364 FAM71F1Q96KD3 344 aaPredicted RBP18.21■□□□□ 0.51
FXN-202ENST00000396364 BARX1Q9HBU1 254 aaPredicted RBP18.21■□□□□ 0.51
FXN-202ENST00000396364 CACNA1DQ01668 2161 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.2■□□□□ 0.5
FXN-202ENST00000396364 OVOL3O00110 214 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 P2RY10O00398 339 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 IGLV3-1P01715 115 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 ACHEP22303 614 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 IRF3Q14653 427 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 CDK5R1Q15078 307 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 TBCEQ15813 527 aaPredicted RBP18.2■□□□□ 0.5
FXN-202ENST00000396364 ODF4Q2M2E3 257 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 ALKBH6Q3KRA9 238 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 IGFBPL1Q8WX77 278 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 MBD6Q96DN6 1003 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 SMIM19Q96E16 107 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 EGLN1Q9GZT9 426 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 HHLA2Q9UM44 414 aa18.2■□□□□ 0.5
FXN-202ENST00000396364 C5orf63A6NC05 138 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 TPD52L2O43399 206 aaKnown RBP18.19■□□□□ 0.5
FXN-202ENST00000396364 NAT2P11245 290 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 CCL1P22362 96 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 CDKN1AP38936 164 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 KIR3DL2P43630 455 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 NANOS3P60323 173 aaKnown RBP18.19■□□□□ 0.5
FXN-202ENST00000396364 ACSM1Q08AH1 577 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 DEFB113Q30KQ7 82 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 SPERTQ8NA61 448 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 PLPP7Q8NBV4 271 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 FCGR1BQ92637 280 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 PPP1R14AQ96A00 147 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 C10orf35Q96D05 121 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 LYZL4Q96KX0 146 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 SLC30A2Q9BRI3 323 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 DECR2Q9NUI1 292 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 NKIRAS2Q9NYR9 191 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 ENPP5Q9UJA9 477 aa18.19■□□□□ 0.5
FXN-202ENST00000396364 ZNF816-ZNF321PA0A0X1KG74 233 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 LOC107986453A0A1B0GWG9 222 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ANXA2P2A6NMY6 339 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 OR4C45A6NMZ5 311 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 OGG1O15527 345 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 GMDSO60547 372 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ADH4P08319 380 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 PAX1P15863 534 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 CDH15P55291 814 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ZNF773Q6PK81 442 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ZNF367Q7RTV3 350 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 LRRC75A-AS1Q8N1F1 130 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ZNF485Q8NCK3 441 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 SGCDQ92629 289 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 NR1H4Q96RI1 486 aaPredicted RBP18.18■□□□□ 0.5
FXN-202ENST00000396364 GSX2Q9BZM3 304 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 MSL2Q9HCI7 577 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 VCX3AQ9NNX9 186 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ISYNA1Q9NPH2 558 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 ZNF701Q9NV72 531 aaPredicted RBP18.18■□□□□ 0.5
FXN-202ENST00000396364 MPC1Q9Y5U8 109 aa18.18■□□□□ 0.5
FXN-202ENST00000396364 LRBAP50851 2863 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 E9PI62 339 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 SPRY3O43610 288 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 SERPINA3P01011 423 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 ANOS1P23352 680 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 GTF2A1P52655 376 aaPredicted RBP18.17■□□□□ 0.5
FXN-202ENST00000396364 OR8G1Q15617 311 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 OR2Z1Q8NG97 314 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 THRSPQ92748 146 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 RNF166Q96A37 237 aaPredicted RBP18.17■□□□□ 0.5
FXN-202ENST00000396364 ELMOD3Q96FG2 381 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 HIST1H2AAQ96QV6 131 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 ADAT1Q9BUB4 502 aaKnown RBP18.17■□□□□ 0.5
FXN-202ENST00000396364 PAPOLGQ9BWT3 736 aaKnown RBP18.17■□□□□ 0.5
FXN-202ENST00000396364 PIGLQ9Y2B2 252 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 V9GYS6 101 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 ABCA12Q86UK0 2595 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 ARFGEF3Q5TH69 2177 aa18.17■□□□□ 0.5
FXN-202ENST00000396364 APCP25054 2843 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 ANKRD17O75179 2603 aaKnown RBP18.16■□□□□ 0.5
FXN-202ENST00000396364 A0A1B0GTI1 187 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 ZSCAN5BA6NJL1 495 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 ZFPL1O95159 310 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 CST4P01036 141 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 CD1AP06126 327 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 CD2P06729 351 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 HSMCR30P0CW71 290 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 ZNF20P17024 532 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 TNFRSF1AP19438 455 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 CELP19835 753 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 SRP9P49458 86 aaKnown RBP18.16■□□□□ 0.5
FXN-202ENST00000396364 EFNA4P52798 201 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 ATP5J2P56134 94 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 PRSS12P56730 875 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 SLC3A1Q07837 685 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 OR13C3Q8NGS6 347 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 OR8S1Q8NH09 359 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 GPR148Q8TDV2 347 aa18.16■□□□□ 0.5
FXN-202ENST00000396364 TSEN15Q8WW01 171 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms