RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 A0A0A6YYH2 397 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 A6NJ64 397 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 XRCC2O43543 280 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 POU2F2P09086 479 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.37
CLIP2-203ENST00000395060 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-203ENST00000395060 IAH1Q2TAA2 248 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-203ENST00000395060 C1orf140Q5VVS0 124 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 HLA-DQA1Q5Y7H0 255 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 OR6S1Q8NH40 331 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 ASB13Q8WXK3 278 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 RGCCQ9H4X1 137 aa12.71□□□□□ -0.37
CLIP2-203ENST00000395060 FRYLO94915 3013 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 NPIPA5E9PKD4 350 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF20P17024 532 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 HNRNPA2B1P22626 353 aaKnown RBP12.71□□□□□ -0.38
CLIP2-203ENST00000395060 PLCXD2Q0VAA5 305 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 FUT7Q11130 342 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 FNDC7Q5VTL7 733 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 C1orf189Q5VU69 101 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 OR5H2Q8NGV7 314 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.38
CLIP2-203ENST00000395060 SCARF2Q96GP6 870 aaPredicted RBP12.71□□□□□ -0.38
CLIP2-203ENST00000395060 SLC2A8Q9NY64 477 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 PRODH2Q9UF12 536 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 NPIPA1Q9UND3 350 aa12.71□□□□□ -0.38
CLIP2-203ENST00000395060 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 MEGF11A6BM72 1044 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF878C9JN71 531 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 PRH1P02810 166 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 CLPSP04118 112 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 IFNA4P05014 189 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 SLC37A1P57057 533 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLIP2-203ENST00000395060 MIDNQ504T8 468 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 REEP6Q96HR9 211 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 S1PR5Q9H228 398 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 TXNIPQ9H3M7 391 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 FBXL17Q9UF56 701 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 MRPS28Q9Y2Q9 187 aaKnown RBP12.7□□□□□ -0.38
CLIP2-203ENST00000395060 UNC13CQ8NB66 2214 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 FREM2Q5SZK8 3169 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 C7orf77A4D0Y5 90 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 ATXN7O15265 892 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-203ENST00000395060 YIF1AO95070 293 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 DIRAS3O95661 229 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 TSPAN15O95858 294 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 TTRP02766 147 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 CTHP32929 405 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 PRSS54Q6PEW0 395 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 KLHL24Q6TFL4 600 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF248Q8NDW4 579 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 ADAMTS17Q8TE56 1095 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 MRGPRX1Q96LB2 322 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF285Q96NJ3 590 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 RHBDD3Q9Y3P4 386 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 URGCP-MRPS24S4R325 110 aa12.7□□□□□ -0.38
CLIP2-203ENST00000395060 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-203ENST00000395060 AHSA1O95433 338 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 SRSF4Q08170 494 aaKnown RBP12.69□□□□□ -0.38
CLIP2-203ENST00000395060 CDPF1Q6NVV7 123 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 SLC22A24Q8N4F4 322 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 APCDD1LQ8NCL9 501 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 OR10H5Q8NGA6 315 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF519Q8TB69 540 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 SLC5A7Q9GZV3 580 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLIP2-203ENST00000395060 CCDC163A0A0D9SF12 145 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
CLIP2-203ENST00000395060 FCGR2CP31995 323 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 FBXW4P57775 412 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 ROM1Q03395 351 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 ECH1Q13011 328 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 SGCBQ16585 318 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 C10orf91Q5T1B1 145 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 TSPO2Q5TGU0 170 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 HSD17B11Q8NBQ5 300 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 OR13G1Q8NGZ3 307 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 SLC22A8Q8TCC7 542 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 EDARADDQ8WWZ3 215 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 TOMM40LQ969M1 308 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 ERGIC1Q969X5 290 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 SLAMF6Q96DU3 332 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 CDC6Q99741 560 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 HDHD3Q9BSH5 251 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-203ENST00000395060 NMES1Q9C002 83 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 MYOZ1Q9NP98 299 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-203ENST00000395060 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
CLIP2-203ENST00000395060 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 CLN5O75503 358 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 SFT2D2O95562 160 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 IL33O95760 270 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 SERPINA2P20848 420 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 CX3CR1P49238 355 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms