RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 CHST6Q9GZX3 395 aa15.53■□□□□ 0.08
SIN3A-203ENST00000394949 KCNE3Q9Y6H6 103 aa15.53■□□□□ 0.08
SIN3A-203ENST00000394949 DEGS1O15121 323 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 GLULP15104 373 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 CHRNB4P30926 498 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 PPP1R1AQ13522 171 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 LINC00696Q6ZRV3 163 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 ZNF784Q8NCA9 323 aaPredicted RBP15.52■□□□□ 0.08
SIN3A-203ENST00000394949 OR4S1Q8NGB4 309 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 OR5M9Q8NGP3 310 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 PINX1Q96BK5 328 aaKnown RBP15.52■□□□□ 0.08
SIN3A-203ENST00000394949 C4orf45Q96LM5 186 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 LIN7CQ9NUP9 197 aaKnown RBP15.52■□□□□ 0.08
SIN3A-203ENST00000394949 C9orf170A2RU37 121 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 NHLRC1Q6VVB1 395 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 UBAC2Q8NBM4 344 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 IL21Q9HBE4 155 aa15.52■□□□□ 0.08
SIN3A-203ENST00000394949 SLX4Q8IY92 1834 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 C7orf66A4D0T2 115 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 G3V3Y1 287 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 H0YIG0 161 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 CLDN34H7C241 214 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 AP4M1O00189 453 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 IGHA1P01876 353 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 AKR1C3P42330 323 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 SUMO1P63165 101 aaKnown RBP15.52■□□□□ 0.07
SIN3A-203ENST00000394949 RUNX2Q13950 521 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 RBMXL3Q8N7X1 1067 aaKnown RBP15.52■□□□□ 0.07
SIN3A-203ENST00000394949 UBE2ZQ9H832 354 aaPredicted RBP15.52■□□□□ 0.07
SIN3A-203ENST00000394949 SH3BGRL2Q9UJC5 107 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.07
SIN3A-203ENST00000394949 CACNA1CQ13936 2221 aa15.52■□□□□ 0.07
SIN3A-203ENST00000394949 CCDC187A0A096LP49 1063 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A6P0DMU7 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A5P0DMU8 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A7P0DMV0 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A8P0DMV1 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A9P0DMV2 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 GLI4P10075 376 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 LGALSLQ3ZCW2 172 aaPredicted RBP15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A2Q5DJT8 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A1Q5HYN5 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SPANXN5Q5MJ07 72 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 NECAP1Q8NC96 275 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CT45A3Q8NHU0 189 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 UQCC1Q9NVA1 299 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 A0A1W2PPQ1 181 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 ANGPTL7O43827 346 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 OPRM1P35372 400 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 PLA1AQ53H76 456 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 LHX8Q68G74 356 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 Q7L0L9 218 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SMIM15Q7Z3B0 74 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 INTS12Q96CB8 462 aaKnown RBP15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SPACA5Q96QH8 159 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 XRCC2O43543 280 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CXCL3P19876 107 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 GABRA2P47869 451 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 PNLIPRP2P54317 469 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 TIGITQ495A1 244 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 KDF1Q8NAX2 398 aaPredicted RBP15.51■□□□□ 0.07
SIN3A-203ENST00000394949 ATOH1Q92858 354 aaPredicted RBP15.51■□□□□ 0.07
SIN3A-203ENST00000394949 MVB12AQ96EY5 273 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SEC11CQ9BY50 192 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 PRDM7Q9NQW5 492 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SLC35D1Q9NTN3 355 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 RCL1Q9Y2P8 373 aaKnown RBP15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SLC10A1Q14973 349 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 C17orf47Q8NEP4 570 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 OR11H7Q8NGC8 314 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 PP6455Q8WZ26 134 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 ZNF275Q9NSD4 429 aaPredicted RBP15.51■□□□□ 0.07
SIN3A-203ENST00000394949 CACFD1Q9UGQ2 172 aa15.51■□□□□ 0.07
SIN3A-203ENST00000394949 SEC14L6B5MCN3 397 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 TPPP2P59282 170 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 LAIR1Q6GTX8 287 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 SYT13Q7L8C5 426 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 ZNF683Q8IZ20 524 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 VPS25Q9BRG1 176 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 WSB1Q9Y6I7 421 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 BTAF1O14981 1849 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 TMEM272A0A1B0GTI8 110 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 H0Y8X5 98 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 SRFP11831 508 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 NPBWR1P48145 328 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.5■□□□□ 0.07
SIN3A-203ENST00000394949 CALHM2Q9HA72 323 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 OPN4Q9UHM6 478 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 FAM96BQ9Y3D0 163 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 TIMM10BQ9Y5J6 103 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 FABP4P15090 132 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 THBS4P35443 961 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 CD96P40200 585 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 SMAD4Q13485 552 aaKnown RBP15.5■□□□□ 0.07
SIN3A-203ENST00000394949 SHBQ15464 509 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 ZNF574Q6ZN55 896 aaPredicted RBP15.5■□□□□ 0.07
SIN3A-203ENST00000394949 BCL7CQ8WUZ0 217 aaPredicted RBP15.5■□□□□ 0.07
SIN3A-203ENST00000394949 TMED3Q9Y3Q3 217 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 FRG2CA6NGY1 282 aa15.5■□□□□ 0.07
SIN3A-203ENST00000394949 NKX2-2O95096 273 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms